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Protein
Submitted name:

382aa long hypothetical sarcosine oxidase

Gene

proDH-B1

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei16FAD; via amide nitrogenCombined sources1
Binding sitei46FMNCombined sources1
Binding sitei172FAD; via amide nitrogen and carbonyl oxygenCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi35 – 36FADCombined sources2
Nucleotide bindingi41 – 44FADCombined sources4
Nucleotide bindingi48 – 50FADCombined sources3
Nucleotide bindingi202 – 204FADCombined sources3
Nucleotide bindingi302 – 304FMNCombined sources3
Nucleotide bindingi335 – 339FADCombined sources5

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

FADCombined sources, Flavoprotein, FMNCombined sources, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BRENDAi1.5.99.B2. 5244.

Names & Taxonomyi

Protein namesi
Submitted name:
382aa long hypothetical sarcosine oxidaseImported
Submitted name:
Dye-linked L-proline dehydrogenase beta1 subunitImported
Gene namesi
Name:proDH-B1Imported
Ordered Locus Names:PH1364Imported
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)Imported
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi70601.PH1364.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1Y56X-ray2.86B1-382[»]
ProteinModelPortaliO59089.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 351DAOInterPro annotationAdd BLAST344

Phylogenomic databases

eggNOGiarCOG00755. Archaea.
COG0665. LUCA.
HOGENOMiHOG000042041.
KOiK00303.
OMAiKYGHAYL.

Family and domain databases

Gene3Di3.50.50.60. 3 hits.
InterProiIPR006076. FAD-dep_OxRdtase.
IPR023753. FAD/NAD-binding_dom.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.

Sequencei

Sequence statusi: Complete.

O59089-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPEKSEIVV IGGGIVGVTI AHELAKRGEE VTVIEKRFIG SGSTFRCGTG
60 70 80 90 100
IRQQFNDEAN VRVMKRSVEL WKKYSEEYGF SFKQTGYLFL LYDDEEVKTF
110 120 130 140 150
KRNIEIQNKF GVPTKLITPE EAKEIVPLLD ISEVIAASWN PTDGKADPFE
160 170 180 190 200
ATTAFAVKAK EYGAKLLEYT EVKGFLIENN EIKGVKTNKG IIKTGIVVNA
210 220 230 240 250
TNAWANLINA MAGIKTKIPI EPYKHQAVIT QPIKRGTINP MVISFKYGHA
260 270 280 290 300
YLTQTFHGGI IGGIGYEIGP TYDLTPTYEF LREVSYYFTK IIPALKNLLI
310 320 330 340 350
LRTWAGYYAK TPDSNPAIGR IEELNDYYIA AGFSGHGFMM APAVGEMVAE
360 370 380
LITKGKTKLP VEWYDPYRFE RGELRTAALQ MG
Length:382
Mass (Da):42,686
Last modified:August 1, 1998 - v1
Checksum:iFB65ACEF152F5C33
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30470.1.
AB196181 Genomic DNA. Translation: BAD77801.1.
PIRiF71008.
RefSeqiWP_010885454.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA30470; BAA30470; BAA30470.
GeneIDi1443692.
KEGGipho:PH1364.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30470.1.
AB196181 Genomic DNA. Translation: BAD77801.1.
PIRiF71008.
RefSeqiWP_010885454.1. NC_000961.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1Y56X-ray2.86B1-382[»]
ProteinModelPortaliO59089.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH1364.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA30470; BAA30470; BAA30470.
GeneIDi1443692.
KEGGipho:PH1364.

Phylogenomic databases

eggNOGiarCOG00755. Archaea.
COG0665. LUCA.
HOGENOMiHOG000042041.
KOiK00303.
OMAiKYGHAYL.

Enzyme and pathway databases

BRENDAi1.5.99.B2. 5244.

Family and domain databases

Gene3Di3.50.50.60. 3 hits.
InterProiIPR006076. FAD-dep_OxRdtase.
IPR023753. FAD/NAD-binding_dom.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiO59089_PYRHO
AccessioniPrimary (citable) accession number: O59089
Secondary accession number(s): Q5R1N3
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: November 2, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.