Skip Header

Contribute Send feedback
Read comments (?) or add your own

O59078 (O59078_PYRHO) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
679aa long hypothetical formate dehydrogenase EMBL BAA30459.1
Gene names
Ordered Locus Names:PH1353
OrganismPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP] EMBL BAA30459.1
Taxonomic identifier70601 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus ›

Protein attributes

Sequence length679 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processformate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionformate dehydrogenase (NAD+) activity

Inferred from electronic annotation. Source: InterPro

molybdenum ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O59078 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: DFE834557D3AC787

FASTA67976,129
        10         20         30         40         50         60 
MLNGIGMGVR VVCPYCGFGC NLLIDPKSRR VKPYPGEPNR GKLCPKGLYA LEHVFSKDRL 

        70         80         90        100        110        120 
KHPLKKEGES FRRISWEKAI SEISTKLKEI IEDYGPGSIA FIASSKVTNE ENYLIQKIAR 

       130        140        150        160        170        180 
LLGTNNVDNC ARLCHESSVH ALKLTLGDGV QTNPYSDLER FGAIMIWGYN PAETHPVVMQ 

       190        200        210        220        230        240 
YILGAKRRGG KIIVIDIRET LTMRFADYRL VIKPGTDITL ANAIMNVIIE GNLYNKEFVE 

       250        260        270        280        290        300 
SRTTGFSEIR MGVKKYTPEY AEKVTGVPAE LIREVAEVFA KAGSGAIMWG MGITQQISGV 

       310        320        330        340        350        360 
ENVLALVDIA LLLGYFGEKG GLYPMRGQNN VQGAAYMGTL SEFLPGYIPL SDSKFRRKVA 

       370        380        390        400        410        420 
KMWGVEDLPT ERGFYLTEYW DAILKGDLKA LYIVGENPAV SDANALKVRK ALTKLDLLVV 

       430        440        450        460        470        480 
QDLFLTKTAR FAHYILPAAA FCEKEGSYMN SERRIQWSFK VCDPPGESKP DWEILVMLAR 

       490        500        510        520        530        540 
ALGLKGFDYS KVEDITREYF KLFPALRNRS IEELKARGII IPAPRLYVDS FNTHDGKARF 

       550        560        570        580        590        600 
VAVEQIMPWE EPNGEYPLIL TTVRLINHYN TGEMTRRSPS LAKMSGESVV FISREDAREY 

       610        620        630        640        650        660 
GIEDGDYVIV ETRRGSLRLK AKIAKIQKGV IAIPFHFDAN LLTNDALNKA GTPEFKFSAA 

       670 
RIRKIEKENY GTKCDEGKG

« Hide

References

[1]"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3."
Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. expand/collapse author list , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T., Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H.
DNA Res. 5:55-76(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000001 Genomic DNA. Translation: BAA30459.1.
PIRC71007.
RefSeqNP_143235.1. NC_000961.1.

3D structure databases

ProteinModelPortalO59078.
ModBaseSearch...

Protein-protein interaction databases

STRING70601.PH1353.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAA30459; BAA30459; BAA30459.
GeneID1443678.
KEGGpho:PH1353.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0243.
HOGENOMHOG000031440.
KOK00123.
OMADLNHARH.
ProtClustDBCLSK253547.

Enzyme and pathway databases

BioCycPHOR70601:GJWR-1359-MONOMER.

Family and domain databases

Gene3D2.40.40.20. 1 hit.
InterProIPR009010. Asp_de-COase-like_dom.
IPR006478. Formate_DH_asu.
IPR006657. MoPterin_dinucl-bd_dom.
IPR006656. Mopterin_OxRdtase.
IPR006963. Mopterin_OxRdtase_4Fe-4S_dom.
[Graphical view]
PfamPF04879. Molybdop_Fe4S4. 1 hit.
PF00384. Molybdopterin. 1 hit.
PF01568. Molydop_binding. 1 hit.
[Graphical view]
SMARTSM00926. Molybdop_Fe4S4. 1 hit.
[Graphical view]
SUPFAMSSF50692. Asp_decarb_fold. 1 hit.
TIGRFAMsTIGR01591. Fdh-alpha. 1 hit.
ProtoNetSearch...

Entry information

Entry nameO59078_PYRHO
AccessionPrimary (citable) accession number: O59078
Entry history
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: May 29, 2013
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info