O59054 (Y1312_PYRHO) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0212 protein PH1312

Gene names

Ordered Locus Names:

PH1312

Organism

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]

Taxonomic identifier

70601 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	104 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0212 family.

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 104	104	UPF0212 protein PH1312 HAMAP MF_01223		PRO_0000068282

Sequences

	Sequence		Length	Mass (Da)
	O59054 [UniParc]. Last modified August 1, 1998. Version 1. Checksum: 84D85AAC5D7ACF01	FASTA	104	11,282
	10 20 30 40 50 60 MGDYIVVLEA PIIVKDVESV EEAIEAAVNK VVNALEKEKL DFVRVELGYS KCPVCGAHFE 70 80 90 100 SAFVVGNVGL VGIYLTLKVF NAQSLEHAER IAKAVVGRAL KKSH

References

[1]

"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3." Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T., Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H. DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000001 Genomic DNA. Translation: BAA30418.1.
PIR	B71002.
RefSeq	NP_143199.1. NC_000961.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000001004; EBPYRP00000001004; EBPYRG00000001004.
GeneID	1443640.
GenomeReviews	Gene locus PH1312 in contig BA000001_GR.
KEGG	pho:PH1312.
NMPDR	fig|70601.1.peg.1293.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000023042.
HOGENOM	HBG497080.
OMA	CGEPFDS.
ProtClustDB	PRK03922.
Enzyme and pathway databases
BioCyc	PHOR70601:PH1312-MONOMER.
Family and domain databases
HAMAP	MF_01223. UPF0212. [Tree]
InterPro	IPR007564. UPF0212. [Graphical view]
KO	K09731.
Pfam	PF04475. DUF555. 1 hit. [Graphical view]
PIRSF	PIRSF016934. UCP016934. 1 hit.
ProDom	PD020367. DUF555. 1 hit. [Graphical view] [Entries sharing at least one domain]
ProtoNet	Search...

Entry information

Entry name

Y1312_PYRHO

Accession

Primary (citable) accession number: O59054

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 19, 2002
Last sequence update:	August 1, 1998
Last modified:	November 16, 2011
This is version 61 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program