O59021 (O59021_PYRHO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
149aa long hypothetical methylmalonyl-CoA decarboxylase gamma chain EMBL BAA30387.1

Gene names

Ordered Locus Names:

PH1284

Organism

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]

Taxonomic identifier

70601 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	149 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Biotin RuleBase RU000428 PDB 2EJF
Technical term	3D-structure PDB 2EJF PDB 2D5D PDB 2EVB PDB 2EJG Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Binding site	115	1	Biotin (covalent) PDB 2EJF

Sequences

	Sequence		Length	Mass (Da)
	O59021 [UniParc]. Last modified August 1, 1998. Version 1. Checksum: 1C3AA5F47E6BA6F1	FASTA	149	15,985
	10 20 30 40 50 60 MMRMKVKVVV NGKEYEVEVE EVMPGKFRVT LEGETYEVET SAGFVTSPKQ VQVPTPAPTP 70 80 90 100 110 120 APAPTPTPAP APSSKTVVSE NVVSAPMPGK VLRVLVRVGD RVRVGQGLLV LEAMKMENEI 130 140 PSPRDGVVKR ILVKEGEAVD TGQPLIELG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3." Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kikuchi H. DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3 and OT3.
[2]	"Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate." Bagautdinov B., Matsuura Y., Bagautdinova S., Kunishima N. J. Biol. Chem. 283:14739-14750(2008) [PubMed: 18372281] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.55 ANGSTROMS) OF 77-149 IN COMPLEX WITH BIOTIN.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000001 Genomic DNA. Translation: BAA30387.1.

PIR

A71074.

RefSeq

NP_143172.1. NC_000961.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2D5D	X-ray	1.55	A/B	77-149	[»]
2EJF	X-ray	2.00	C/D	77-149	[»]
2EJG	X-ray	2.71	C/D	77-149	[»]
2EVB	X-ray	1.55	A	77-149	[»]

ProteinModelPortal

O59021.

SMR

O59021. Positions 77-149.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EBPYRT00000001626; EBPYRP00000001626; EBPYRG00000001626.

GeneID

1443607.

GenomeReviews

Gene locus PH1284 in contig BA000001_GR.

KEGG

pho:PH1284.

NMPDR

fig|70601.1.peg.1260.

Organism-specific databases

CMR

Search...

Phylogenomic databases

GeneTree

EBGT00050000022674.

HOGENOM

HBG745267.

OMA

QPLMILE.

ProtClustDB

PRK05641.

Enzyme and pathway databases

BioCyc

PHOR70601:PH1284-MONOMER.

Family and domain databases

InterPro

IPR001882. Biotin_BS.
IPR000089. Biotin_lipoyl.
IPR011053. Single_hybrid_motif.
[Graphical view]

Pfam

PF00364. Biotin_lipoyl. 1 hit.
[Graphical view]

SUPFAM

SSF51230. Hybrid_motif. 1 hit.

PROSITE

PS00188. BIOTIN. 1 hit.
PS50968. BIOTINYL_LIPOYL. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

O59021_PYRHO

Accession

Primary (citable) accession number: O59021

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	October 19, 2011
This is version 79 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)