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Protein

30S ribosomal protein S8e

Gene

rps8e

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-1092-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8e
Gene namesi
Name:rps8e
Ordered Locus Names:PH1103
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 12712730S ribosomal protein S8ePRO_0000122277Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.By similarity

Protein-protein interaction databases

STRINGi70601.PH1103.

Structurei

3D structure databases

ProteinModelPortaliO58830.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8e family.Curated

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiNPNYVRR.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O58830-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIWQGRSLK KPSGGRIVLA RKKRKRELGR EPSNTRVAEQ DKRKIIRTYG
60 70 80 90 100
GNRKVRLTAA AYANVFDKSG KGRKVRIIRV LENPANRQFA RRNIITKGAI
110 120
IETEIGKAKV TSRPGQDGVV NAILLEE
Length:127
Mass (Da):14,262
Last modified:August 1, 1998 - v1
Checksum:i63FF0F592B5AFFEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30202.1.
PIRiH71050.
RefSeqiWP_010885186.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA30202; BAA30202; BAA30202.
GeneIDi1443421.
KEGGipho:PH1103.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30202.1.
PIRiH71050.
RefSeqiWP_010885186.1. NC_000961.1.

3D structure databases

ProteinModelPortaliO58830.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH1103.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA30202; BAA30202; BAA30202.
GeneIDi1443421.
KEGGipho:PH1103.

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiNPNYVRR.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-1092-MONOMER.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3.

Entry informationi

Entry nameiRS8E_PYRHO
AccessioniPrimary (citable) accession number: O58830
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 1, 1998
Last modified: November 11, 2015
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.