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Protein

UPF0310 protein PH1033

Gene

PH1033

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-1026-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0310 protein PH1033UniRule annotation
Gene namesi
Ordered Locus Names:PH1033
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000596381 – 145UPF0310 protein PH1033Add BLAST145

Interactioni

Protein-protein interaction databases

STRINGi70601.PH1033.

Structurei

Secondary structure

1145
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 8Combined sources6
Helixi10 – 19Combined sources10
Beta strandi21 – 24Combined sources4
Helixi26 – 28Combined sources3
Helixi29 – 32Combined sources4
Beta strandi40 – 45Combined sources6
Beta strandi59 – 66Combined sources8
Beta strandi90 – 104Combined sources15
Helixi105 – 110Combined sources6
Helixi120 – 123Combined sources4
Turni124 – 126Combined sources3
Beta strandi128 – 132Combined sources5
Helixi134 – 143Combined sources10

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WMMX-ray2.20A1-145[»]
2HD9X-ray1.35A1-145[»]
2ZBNX-ray2.00A1-145[»]
ProteinModelPortaliO58764.
SMRiO58764.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO58764.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0310 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG02727. Archaea.
COG1673. LUCA.
HOGENOMiHOG000244906.
OMAiEKNVWGV.

Family and domain databases

Gene3Di3.10.590.10. 1 hit.
HAMAPiMF_00771. UPF0310. 1 hit.
InterProiIPR002740. EVE_domain.
IPR015947. PUA-like_domain.
IPR022996. UPF0310.
[Graphical view]
PfamiPF01878. EVE. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.

Sequencei

Sequence statusi: Complete.

O58764-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYWICITNR ENWEVIKRHN VWGVPKKHKN TLSRVKPGDK LVIYVRQEKD
60 70 80 90 100
KEGNLLEPKI VGIYEVTSEP YVDFSRIFKP HRGGKETYPY RVKIKPIKIG
110 120 130 140
EINFKPLIND LKFIKNKKRW SMHFFGKAMR ELPEEDYKLI EKLLL
Length:145
Mass (Da):17,430
Last modified:August 1, 1998 - v1
Checksum:i5552260A2498A7AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30131.1.
PIRiE71096.
RefSeqiWP_010885121.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA30131; BAA30131; BAA30131.
GeneIDi1443356.
KEGGipho:PH1033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30131.1.
PIRiE71096.
RefSeqiWP_010885121.1. NC_000961.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1WMMX-ray2.20A1-145[»]
2HD9X-ray1.35A1-145[»]
2ZBNX-ray2.00A1-145[»]
ProteinModelPortaliO58764.
SMRiO58764.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH1033.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA30131; BAA30131; BAA30131.
GeneIDi1443356.
KEGGipho:PH1033.

Phylogenomic databases

eggNOGiarCOG02727. Archaea.
COG1673. LUCA.
HOGENOMiHOG000244906.
OMAiEKNVWGV.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-1026-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO58764.

Family and domain databases

Gene3Di3.10.590.10. 1 hit.
HAMAPiMF_00771. UPF0310. 1 hit.
InterProiIPR002740. EVE_domain.
IPR015947. PUA-like_domain.
IPR022996. UPF0310.
[Graphical view]
PfamiPF01878. EVE. 1 hit.
[Graphical view]
SUPFAMiSSF88697. SSF88697. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY1033_PYRHO
AccessioniPrimary (citable) accession number: O58764
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2004
Last sequence update: August 1, 1998
Last modified: November 2, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.