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Protein

UPF0201 protein PH1010

Gene

PH1010

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-1001-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0201 protein PH1010UniRule annotation
Gene namesi
Ordered Locus Names:PH1010
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000945161 – 138UPF0201 protein PH1010Add BLAST138

Interactioni

Protein-protein interaction databases

STRINGi70601.PH1010.

Structurei

Secondary structure

1138
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 14Combined sources9
Helixi20 – 30Combined sources11
Beta strandi35 – 40Combined sources6
Beta strandi42 – 51Combined sources10
Turni54 – 57Combined sources4
Helixi58 – 66Combined sources9
Helixi70 – 79Combined sources10
Beta strandi85 – 91Combined sources7
Helixi92 – 96Combined sources5
Beta strandi110 – 116Combined sources7
Helixi120 – 127Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3D7AX-ray1.90A/B1-138[»]
ProteinModelPortaliO58738.
SMRiO58738.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO58738.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0201 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01043. Archaea.
COG1931. LUCA.
HOGENOMiHOG000224697.
KOiK09736.
OMAiKWLAPRT.
OrthoDBiPOG093Z0FFL.

Family and domain databases

Gene3Di3.30.1440.10. 1 hit.
HAMAPiMF_01112. UPF0201. 1 hit.
InterProiView protein in InterPro
IPR022803. Ribosomal_L5_domain.
IPR002739. UPF0201.
PfamiView protein in Pfam
PF01877. RNA_binding. 1 hit.
SUPFAMiSSF55282. SSF55282. 1 hit.

Sequencei

Sequence statusi: Complete.

O58738-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMTMFEEVEV EAYVYPTEDI RKVKKAMLNL IPGLQFEAFD KGEYVILVGR
60 70 80 90 100
TKDKRALQRL YELFRGQQIL DTARMMLEEG YFGEEIIIKV HKQVAYVGKV
110 120 130
NFNEDSPLGP ITITIRTKEP QKLMKWLAPR TKDGVPIE
Length:138
Mass (Da):16,056
Last modified:August 1, 1998 - v1
Checksum:iE8AD6AF461AE96FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30107.1.
PIRiE71093.

Genome annotation databases

EnsemblBacteriaiBAA30107; BAA30107; BAA30107.
KEGGipho:PH1010.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiY1010_PYRHO
AccessioniPrimary (citable) accession number: O58738
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 27, 2002
Last sequence update: August 1, 1998
Last modified: June 7, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries