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Protein

UPF0201 protein PH1010

Gene

PH1010

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-1001-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0201 protein PH1010UniRule annotation
Gene namesi
Ordered Locus Names:PH1010
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000945161 – 138UPF0201 protein PH1010Add BLAST138

Interactioni

Protein-protein interaction databases

STRINGi70601.PH1010.

Structurei

Secondary structure

1138
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 14Combined sources9
Helixi20 – 30Combined sources11
Beta strandi35 – 40Combined sources6
Beta strandi42 – 51Combined sources10
Turni54 – 57Combined sources4
Helixi58 – 66Combined sources9
Helixi70 – 79Combined sources10
Beta strandi85 – 91Combined sources7
Helixi92 – 96Combined sources5
Beta strandi110 – 116Combined sources7
Helixi120 – 127Combined sources8

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3D7AX-ray1.90A/B1-138[»]
ProteinModelPortaliO58738.
SMRiO58738.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO58738.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0201 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01043. Archaea.
COG1931. LUCA.
HOGENOMiHOG000224697.
KOiK09736.
OMAiEVEAYVY.

Family and domain databases

Gene3Di3.30.1440.10. 1 hit.
HAMAPiMF_01112. UPF0201. 1 hit.
InterProiIPR022803. Ribosomal_L5_domain.
IPR002739. UPF0201.
[Graphical view]
PfamiPF01877. RNA_binding. 1 hit.
[Graphical view]
SUPFAMiSSF55282. SSF55282. 1 hit.

Sequencei

Sequence statusi: Complete.

O58738-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMTMFEEVEV EAYVYPTEDI RKVKKAMLNL IPGLQFEAFD KGEYVILVGR
60 70 80 90 100
TKDKRALQRL YELFRGQQIL DTARMMLEEG YFGEEIIIKV HKQVAYVGKV
110 120 130
NFNEDSPLGP ITITIRTKEP QKLMKWLAPR TKDGVPIE
Length:138
Mass (Da):16,056
Last modified:August 1, 1998 - v1
Checksum:iE8AD6AF461AE96FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30107.1.
PIRiE71093.

Genome annotation databases

EnsemblBacteriaiBAA30107; BAA30107; BAA30107.
KEGGipho:PH1010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30107.1.
PIRiE71093.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3D7AX-ray1.90A/B1-138[»]
ProteinModelPortaliO58738.
SMRiO58738.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH1010.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA30107; BAA30107; BAA30107.
KEGGipho:PH1010.

Phylogenomic databases

eggNOGiarCOG01043. Archaea.
COG1931. LUCA.
HOGENOMiHOG000224697.
KOiK09736.
OMAiEVEAYVY.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-1001-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO58738.

Family and domain databases

Gene3Di3.30.1440.10. 1 hit.
HAMAPiMF_01112. UPF0201. 1 hit.
InterProiIPR022803. Ribosomal_L5_domain.
IPR002739. UPF0201.
[Graphical view]
PfamiPF01877. RNA_binding. 1 hit.
[Graphical view]
SUPFAMiSSF55282. SSF55282. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY1010_PYRHO
AccessioniPrimary (citable) accession number: O58738
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 27, 2002
Last sequence update: August 1, 1998
Last modified: November 2, 2016
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.