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Protein

UPF0271 protein PH0986

Gene

PH0986

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciPHOR70601:G1G39-962-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0271 protein PH0986UniRule annotation
Gene namesi
Ordered Locus Names:PH0986
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001850661 – 255UPF0271 protein PH0986Add BLAST255

Interactioni

Protein-protein interaction databases

MINTiO58714
STRINGi70601.PH0986

Structurei

Secondary structure

1255
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 9Combined sources8
Helixi21 – 24Combined sources4
Turni25 – 27Combined sources3
Beta strandi29 – 34Combined sources6
Beta strandi36 – 39Combined sources4
Helixi42 – 54Combined sources13
Beta strandi58 – 62Combined sources5
Turni68 – 72Combined sources5
Helixi80 – 100Combined sources21
Beta strandi105 – 108Combined sources4
Helixi112 – 120Combined sources9
Helixi122 – 135Combined sources14
Beta strandi140 – 144Combined sources5
Helixi148 – 156Combined sources9
Beta strandi160 – 164Combined sources5
Beta strandi168 – 170Combined sources3
Beta strandi176 – 178Combined sources3
Helixi189 – 202Combined sources14
Beta strandi203 – 206Combined sources4
Beta strandi212 – 214Combined sources3
Beta strandi218 – 221Combined sources4
Helixi227 – 242Combined sources16
Helixi250 – 252Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1V6TX-ray1.70A1-255[»]
ProteinModelPortaliO58714
SMRiO58714
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO58714

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0271 (lamB) family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG05810 Archaea
COG1540 LUCA
HOGENOMiHOG000237330
KOiK07160
OMAiVNIACGF
OrthoDBiPOG093Z07HK

Family and domain databases

HAMAPiMF_00691 UPF0271, 1 hit
InterProiView protein in InterPro
IPR011330 Glyco_hydro/deAcase_b/a-brl
IPR005501 UPF0271_LamB_YcsF
PANTHERiPTHR30292 PTHR30292, 1 hit
PfamiView protein in Pfam
PF03746 LamB_YcsF, 1 hit
SUPFAMiSSF88713 SSF88713, 1 hit

Sequencei

Sequence statusi: Complete.

O58714-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVDLNSDLG ESFGRYKLGL DEEVMKYITS ANVACGWHAG DPLVMRKTVR
60 70 80 90 100
LAKENDVQVG AHPGYPDLMG FGRRYMKLTP EEARNYILYQ VGALYAFAKA
110 120 130 140 150
EGLELQHVKP HGALYNAMVK EEDLARAVIE GILDFDKDLI LVTLSNSRVA
160 170 180 190 200
DIAEEMGLKV AHEVFADRAY NPDGTLVPRG RPGAVIEDKE EIAERVISMV
210 220 230 240 250
KDGGIRAING EWVDLKVDTI CVHGDNPKAV EITSYIRKVL EEEGVKIVPM

KEFIR
Length:255
Mass (Da):28,431
Last modified:August 1, 1998 - v1
Checksum:i1536EF00FDFA09B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA Translation: BAA30083.1
PIRiE71090
RefSeqiWP_010885076.1, NC_000961.1

Genome annotation databases

EnsemblBacteriaiBAA30083; BAA30083; BAA30083
GeneIDi1443311
KEGGipho:PH0986

Similar proteinsi

Entry informationi

Entry nameiY986_PYRHO
AccessioniPrimary (citable) accession number: O58714
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 4, 2003
Last sequence update: August 1, 1998
Last modified: April 25, 2018
This is version 97 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
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Main funding by: National Institutes of Health