Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L15e

Gene

rpl15e

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-972-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L15e
Gene namesi
Name:rpl15e
Ordered Locus Names:PH0978
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 19419450S ribosomal protein L15ePRO_0000127583Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi70601.PH0978.

Structurei

3D structure databases

ProteinModelPortaliO58706.
SMRiO58706. Positions 1-192.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L15e family.Curated

Phylogenomic databases

eggNOGiarCOG04209. Archaea.
COG1632. LUCA.
HOGENOMiHOG000229584.
KOiK02877.
OMAiGHRYSQT.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
HAMAPiMF_00256. Ribosomal_L15e. 1 hit.
InterProiIPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020926. Ribosomal_L15e_arc.
IPR020925. Ribosomal_L15e_CS.
IPR012678. Ribosomal_L23/L15e_core_dom.
[Graphical view]
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiPF00827. Ribosomal_L15e. 1 hit.
[Graphical view]
SMARTiSM01384. Ribosomal_L15e. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiPS01194. RIBOSOMAL_L15E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O58706-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGMYKYIREA WKSPKKSYVG QLLKQRMIKW RREPSVVRIE RPTRLDRARA
60 70 80 90 100
LGYQAKQGYI IVRVRVRRGG RKRPRWKGGR KPSKMGQVKY SPKKSLQWIA
110 120 130 140 150
EEKAARKFPN LEVLNSYWVG EDGMYKWFEV IMVDPHHPVI KSDPKIAWIA
160 170 180 190
LKHHKGRVFR GLTSAGKKGR GLRNKGKGAE KIRPSIRANE GKGK
Length:194
Mass (Da):22,632
Last modified:December 1, 2000 - v2
Checksum:i185C3596D95022DA
GO

Sequence cautioni

The sequence BAA30075 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30075.1. Different initiation.
PIRiE71089.
RefSeqiWP_010885068.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA30075; BAA30075; BAA30075.
GeneIDi1443303.
KEGGipho:PH0978.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA30075.1. Different initiation.
PIRiE71089.
RefSeqiWP_010885068.1. NC_000961.1.

3D structure databases

ProteinModelPortaliO58706.
SMRiO58706. Positions 1-192.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH0978.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA30075; BAA30075; BAA30075.
GeneIDi1443303.
KEGGipho:PH0978.

Phylogenomic databases

eggNOGiarCOG04209. Archaea.
COG1632. LUCA.
HOGENOMiHOG000229584.
KOiK02877.
OMAiGHRYSQT.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-972-MONOMER.

Family and domain databases

Gene3Di3.40.1120.10. 1 hit.
HAMAPiMF_00256. Ribosomal_L15e. 1 hit.
InterProiIPR024794. Rbsml_L15e_core_dom.
IPR000439. Ribosomal_L15e.
IPR020926. Ribosomal_L15e_arc.
IPR020925. Ribosomal_L15e_CS.
IPR012678. Ribosomal_L23/L15e_core_dom.
[Graphical view]
PANTHERiPTHR11847. PTHR11847. 1 hit.
PfamiPF00827. Ribosomal_L15e. 1 hit.
[Graphical view]
SMARTiSM01384. Ribosomal_L15e. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.
PROSITEiPS01194. RIBOSOMAL_L15E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL15E_PYRHO
AccessioniPrimary (citable) accession number: O58706
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: December 1, 2000
Last modified: September 7, 2016
This is version 87 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.