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Protein

Uncharacterized protein PH0856

Gene

PH0856

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Cofactori

FMNBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-850-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein PH0856
Gene namesi
Ordered Locus Names:PH0856
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000855311 – 172Uncharacterized protein PH0856Add BLAST172

Interactioni

Protein-protein interaction databases

STRINGi70601.PH0856.

Structurei

Secondary structure

1172
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi3 – 7Combined sources5
Beta strandi9 – 11Combined sources3
Beta strandi13 – 17Combined sources5
Helixi20 – 22Combined sources3
Beta strandi24 – 28Combined sources5
Beta strandi31 – 35Combined sources5
Turni36 – 39Combined sources4
Beta strandi40 – 45Combined sources6
Helixi50 – 58Combined sources9
Beta strandi59 – 65Combined sources7
Helixi68 – 70Combined sources3
Helixi71 – 77Combined sources7
Helixi83 – 88Combined sources6
Beta strandi97 – 101Combined sources5
Beta strandi107 – 121Combined sources15
Beta strandi124 – 136Combined sources13
Helixi138 – 141Combined sources4
Helixi148 – 150Combined sources3
Beta strandi154 – 157Combined sources4
Beta strandi160 – 162Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2R6VX-ray1.25A1-172[»]
3ZOCX-ray2.10A1-172[»]
3ZODX-ray1.68A1-172[»]
3ZOGX-ray1.75A1-172[»]
ProteinModelPortaliO58586.
SMRiO58586.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO58586.

Family & Domainsi

Sequence similaritiesi

Belongs to the flavoredoxin family.Curated

Phylogenomic databases

eggNOGiarCOG02017. Archaea.
COG1853. LUCA.
HOGENOMiHOG000115785.
OMAiDVWIAGT.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR002563. Flavin_Rdtase-like_dom.
IPR012349. Split_barrel_FMN-bd.
[Graphical view]
PfamiPF01613. Flavin_Reduct. 1 hit.
[Graphical view]
SMARTiSM00903. Flavin_Reduct. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.

Sequencei

Sequence statusi: Complete.

O58586-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGYRLLYPM RTYLIVSGHG EETNVMAADW VTVVSFDPFI VGVAVAPKRT
60 70 80 90 100
THKLIKKYGE FVISVPSLDV LRDVWIAGTK KGPSKLKEMS VTLIPSKKVK
110 120 130 140 150
VPSIEEALAN IECRVIDARS YGDHTFFVGE VVGYTYKDYA FEKGKPNLKA
160 170
KFLAHVSWSE FVTFSEKVHK AE
Length:172
Mass (Da):19,349
Last modified:August 1, 1998 - v1
Checksum:iC8022791E6CC5C22
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29950.1.
PIRiD71136.
RefSeqiWP_010884948.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA29950; BAA29950; BAA29950.
GeneIDi1443183.
KEGGipho:PH0856.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29950.1.
PIRiD71136.
RefSeqiWP_010884948.1. NC_000961.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2R6VX-ray1.25A1-172[»]
3ZOCX-ray2.10A1-172[»]
3ZODX-ray1.68A1-172[»]
3ZOGX-ray1.75A1-172[»]
ProteinModelPortaliO58586.
SMRiO58586.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH0856.

Protocols and materials databases

DNASUi1443183.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA29950; BAA29950; BAA29950.
GeneIDi1443183.
KEGGipho:PH0856.

Phylogenomic databases

eggNOGiarCOG02017. Archaea.
COG1853. LUCA.
HOGENOMiHOG000115785.
OMAiDVWIAGT.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-850-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO58586.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR002563. Flavin_Rdtase-like_dom.
IPR012349. Split_barrel_FMN-bd.
[Graphical view]
PfamiPF01613. Flavin_Reduct. 1 hit.
[Graphical view]
SMARTiSM00903. Flavin_Reduct. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY856_PYRHO
AccessioniPrimary (citable) accession number: O58586
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: August 1, 1998
Last modified: November 2, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.