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Unreviewed, UniProtKB/TrEMBL O58565 (O58565_PYRHO)

Last modified June 16, 2009. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    856aa long hypothetical alpha-mannosidase EMBL BAA29929.1
Gene names
Ordered Locus Names: PH0835
OrganismPyrococcus horikoshii [Complete proteome] [HAMAP]
Taxonomic identifier53953 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus

Protein attributes

Sequence length856 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Sequences

Sequence LengthMass (Da)Tools
O58565-1 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: B60EFA738C0B44BC

FASTA856100,361
        10         20         30         40         50         60 
MTNPWKIFLV SYAHIDSEWL WKVDETVNIC KLTFENTLKL MEKYNFLTFA HGPVFYYELM 

        70         80         90        100        110        120 
ESHYPNIFRK IKEMVDRKQW KIIDGSYVEF DANIPSGESL IRQFLYGIKY LEEKFGVKPR 

       130        140        150        160        170        180 
TLYLPDSFGF PPTLPKILCE VGIENFATSK LNWNDTNPFP YHIFRWKSRS GEEVLAYSTP 

       190        200        210        220        230        240 
GSYSDYLSDI KRILWNVEQQ REKQEIPVIM QVFGRGDHGG GPEEIEVQNV KKWMEEYKGR 

       250        260        270        280        290        300 
LELIASGMDE FFDYVREHYL KDLPIFEDEL YLEFHRGIFT TGAWIKRFNR LNEHLILQVE 

       310        320        330        340        350        360 
KLYSLLKILY GIEYPWEGIL NSWKAILLTQ GHDALPASIT KEVYDDVMRR SSNVYKGLLS 

       370        380        390        400        410        420 
FLRNGLKVIA EKEKARYIVF NPNSFPVSPY IRTWESVNGF YQRLKNGSKL VYLSELPPIG 

       430        440        450        460        470        480 
FKGYEEVGER PEDFVNIVER EKDFILENSY LRVTVSKRTG WITSIYDKKN KREILKEPIR 

       490        500        510        520        530        540 
PRIMLDYPMP FRGRFVPASM FDAWEVYYRE GINKYFHRDL RAKEVFISER GPLYASISAK 

       550        560        570        580        590        600 
FHYKQFLGKA STMEFEIGLY ADKPYVEVRF RAHWNTHHRF LKLLVPVAID SDKAVFEVPY 

       610        620        630        640        650        660 
GIVERADACR SENPRERAKY EVLGHKWVDI SDGSYGVAVI NDSKYGFSWC NGVLRISLLR 

       670        680        690        700        710        720 
SPSQPLADFI MKFIRMNKKA QEKFQDIKLQ KSGKLKREII NIIIWLMVLF NELRNKKKVT 

       730        740        750        760        770        780 
PIDRGYHIAT VWVYPHEGNY VKGNVPMLAT ELNTLYILQK GSGSSSTIWN FINVEPQEKL 

       790        800        810        820        830        840 
QVVTVKPCEN GDCFVLRLFN PTDERLKAIL RFNVKVKSAA EATHDERFLR GLPVRDNSVE 

       850 
VSLGSYEVRT LLITVL 

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References

[1]"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3."
Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. expand/collapse author list , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Yoshizawa T., Nakamura Y., Robb F.T., Horikoshi K., Masuchi Y., Shizuya H., Kikuchi H.
DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OT3.

Cross-references

Sequence databases

BA000001 Genomic DNA. Translation: BAA29929.1.
PIRG71133.
RefSeqNP_142770.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGH38. Glycoside Hydrolase Family 38.

Genome annotation databases

GeneID1443166.
GenomeReviewsGene locus PH0835 in contig BA000001_GR.
KEGGpho:PH0835.
NMPDRfig|70601.1.peg.819.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMO58565.
OMAO58565. PDFFADE.

Family and domain databases

InterProIPR011682. Glyco_hydro_38_C.
IPR015341. Glyco_hydro_38_central.
IPR000602. Glyco_hydro_38_core.
[Graphical view]
Gene3DG3DSA:3.20.110.10. Glyco_hydro_38_core. 1 hit.
PfamPF09261. Alpha-mann_mid. 1 hit.
PF01074. Glyco_hydro_38. 1 hit.
PF07748. Glyco_hydro_38C. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO58565_PYRHO
AccessionPrimary (citable) accession number: O58565
Entry history
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: June 16, 2009
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information