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Protein

Site-determining protein

Gene

PH0612

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei207 – 2071ADPCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi10 – 178ATPUniRule annotation
Nucleotide bindingi13 – 186ADPCombined sources
Nucleotide bindingi171 – 1722ADPCombined sources
Nucleotide bindingi198 – 2003ADPCombined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Cell cycle, Cell divisionImported

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-607-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Site-determining proteinUniRule annotation
Gene namesi
Ordered Locus Names:PH0612Imported
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)Imported
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi70601.PH0612.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1IONX-ray2.30A1-243[»]
ProteinModelPortaliO58346.
SMRiO58346. Positions 1-243.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO58346.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 201197CbiAInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the ParA family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG00589. Archaea.
COG0455. LUCA.
HOGENOMiHOG000019419.
KOiK03609.
OMAiAYCNIAR.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR002586. CobQ/CobB/MinD/ParA_Nub-bd_dom.
IPR025501. MinD.
IPR010224. MinD_archaea.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF01656. CbiA. 1 hit.
[Graphical view]
PIRSFiPIRSF003092. MinD. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01969. minD_arch. 1 hit.

Sequencei

Sequence statusi: Complete.

O58346-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRIISIVSG KGGTGKTTVT ANLSVALGEM GRKVLAVDGD LTMANLSLVL
60 70 80 90 100
GVDDVNITLH DVLAGDAKLE DAIYMTQFEN VYILPGAVDW EHVIKADPRK
110 120 130 140 150
LPEVIKSLKG KYDFILIDCP AGLQLDAMSA MLSGEEAILV TNPEISCLTD
160 170 180 190 200
TMKVGMVLKK AGLAILGFIL NRYGRSERDI PPEAAQDVMD VPLLAVIPED
210 220 230 240
PVIREGTLEG IPAVKYKPES KGAQAFIKLA EEVDKLAGIK AKIMY
Length:245
Mass (Da):26,307
Last modified:August 1, 1998 - v1
Checksum:iF872BF58E7C8357A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29701.1.
PIRiC71105.
RefSeqiWP_010884711.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA29701; BAA29701; BAA29701.
GeneIDi1442945.
KEGGipho:PH0612.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29701.1.
PIRiC71105.
RefSeqiWP_010884711.1. NC_000961.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1IONX-ray2.30A1-243[»]
ProteinModelPortaliO58346.
SMRiO58346. Positions 1-243.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH0612.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA29701; BAA29701; BAA29701.
GeneIDi1442945.
KEGGipho:PH0612.

Phylogenomic databases

eggNOGiarCOG00589. Archaea.
COG0455. LUCA.
HOGENOMiHOG000019419.
KOiK03609.
OMAiAYCNIAR.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-607-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO58346.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR002586. CobQ/CobB/MinD/ParA_Nub-bd_dom.
IPR025501. MinD.
IPR010224. MinD_archaea.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF01656. CbiA. 1 hit.
[Graphical view]
PIRSFiPIRSF003092. MinD. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR01969. minD_arch. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3Imported.
  2. "The three-dimensional structure of septum site-determining protein MinD from Pyrococcus horikoshii OT3 in complex with Mg-ADP."
    Sakai N., Yao M., Itou H., Watanabe N., Yumoto F., Tanokura M., Tanaka I.
    Structure 9:817-826(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF 1-243 IN COMPLEX WITH ADP.

Entry informationi

Entry nameiO58346_PYRHO
AccessioniPrimary (citable) accession number: O58346
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: March 16, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.