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O58247 (O58247_PYRHO) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
778aa long hypothetical beta-galactosidase EMBL BAA29599.1
Gene names
Ordered Locus Names:PH0511
OrganismPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]
Taxonomic identifier70601 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length778 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular functionbeta-galactosidase activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O58247 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: A5A5E754017615E1

FASTA77891,169
        10         20         30         40         50         60 
MVGMKVQHDG RLYSLDDERI VVYGGTLQYF RVPRNYWEDR LRKMKSHGLN TVETYIAWNW 

        70         80         90        100        110        120 
HEPQEGVFDF TGETHPQRDL IGFLELAQKL GLYVIIRPGP YICGEWKNGG IPDWLINSHP 

       130        140        150        160        170        180 
EILAKSPNGS FPRDVYYPPI TYLHPTYLEY AMKWYEEVLP IIRDYLYSNG GSIISVTIDD 

       190        200        210        220        230        240 
EPSYWETIFQ PFLTDYNEII VRENGIWHSW LKENYSLGDL EERYGERFSD YTEIAPPKSF 

       250        260        270        280        290        300 
SEPLPKVLDW HHFKIWMINE YVRRLYEKIR EYVDVPISLL DPYLLLAAWK EFYLYVTRHK 

       310        320        330        340        350        360 
LDIHLWTEFW YSFYRTFDFK EDKLGHLYFK TGIYRYYVSK LKTPPLSIET QASLANVIEK 

       370        380        390        400        410        420 
DEAELLYALL PALGIHNLNY YLYVGGENPR GYESHNGVTW DVYSPIGLDG RERQHVEPIK 

       430        440        450        460        470        480 
WIGEFLKSNI DFVDSQFKAR VAFGMYEPYE ALNLWGYKPE SFEESVNLNE YLFGERGLLT 

       490        500        510        520        530        540 
LLAMSNVPFD VIDLEISTLE EMLQYEQIWV YSLDFMSREV QEKLIKYVEE GGNLVILPTL 

       550        560        570        580        590        600 
PYLDENMKPC TRLRDFLGVE VERAKARDNM RLIPYLSVDA EGIDRMVVRN VAREVKGGEA 

       610        620        630        640        650        660 
IAWIGDKVVG TIVRKGKGSA VILGFRLQYY SSYHDMHRKF VDKILQLQGV KREVEVSNRD 

       670        680        690        700        710        720 
IIAIPRIHYL VLVNPRDEEV AGKVKYRGVE FEIKMKGRGV LFIPVDVEIN GVKLVYATAT 

       730        740        750        760        770 
PIGGGNRRIK FRNHLSDTSE IAIRDGRIRG VKGGYVLQEK GERVYVIRHE RETFEIEF

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References

[1]"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3."
Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. expand/collapse author list , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kikuchi H.
DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3 and OT3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000001 Genomic DNA. Translation: BAA29599.1.
PIRB71164.
RefSeqNP_142480.1. NC_000961.1.

3D structure databases

ProteinModelPortalO58247.
ModBaseSearch...

Protein family/group databases

CAZyGH35. Glycoside Hydrolase Family 35.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBPYRT00000001197; EBPYRP00000001197; EBPYRG00000001197.
GeneID1444400.
GenomeReviewsGene locus PH0511 in contig BA000001_GR.
KEGGpho:PH0511.
NMPDRfig|70601.1.peg.500.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00050000023333.
HOGENOMHBG645311.
OMAWMINEYV.
ProtClustDBCLSK865320.

Enzyme and pathway databases

BioCycPHOR70601:PH0511-MONOMER.

Family and domain databases

InterProIPR013738. Beta_galactosidase_Trimer.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK12308.
PANTHERPTHR23421. Glyco_hydro_35. 1 hit.
PfamPF02449. Glyco_hydro_42. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameO58247_PYRHO
AccessionPrimary (citable) accession number: O58247
Entry history
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: November 16, 2011
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info