O58237 (O58237_PYRHO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
483aa long hypothetical beta-mannosidase EMBL BAA29589.1

Gene names

Ordered Locus Names:

PH0501

Organism

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]

Taxonomic identifier

70601 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	483 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O58237 [UniParc]. Last modified August 1, 1998. Version 1. Checksum: 46725494C32283D6	FASTA	483	56,458
	10 20 30 40 50 60 MKFYWGVVQS AFQFEMGDPY RRNIDPRSDW WYWVRDPYNI KNDLVSGDLP EEGINNYELY 70 80 90 100 110 120 EIDHRLAKEL GLNAYQLTIE WSRIFPCPTF NVEVEFERDG YGLIKKVKIE KEHLEELDKL 130 140 150 160 170 180 ANQKEVRHYL NVLRNLKKLG FTTFVTLNHQ TNPIWIHDPI ETRGNFQKAR ARGWVDERTI 190 200 210 220 230 240 IEFAKYAAYV AWKFDNYVDY WSTFDEPMVT AELGYLAPYV GWPPGILNPS AAKKVIINQI 250 260 270 280 290 300 VAHARAYDSI KKFSSKPVGV ILNIIPAYPL DPNDSKSVRA AENYDLFHNR LFLEAVNRGN 310 320 330 340 350 360 VDLDITGEYT KIPHIKRNDW IGNNYYTREV VKYVEPKYEE LPLITFVGVE GYGYSGNPNS 370 380 390 400 410 420 LSPDNNPTSD FGWEVFPQGL YDSTLEAAEY NKEVFITENG IADSKDILRP RYIIDHVNEV 430 440 450 460 470 480 KKLIENGIKV GGYFHWALTD NYEWAMGFKI RFGLYEVDLI TKERIPRRRS VEIYKKIVME GIE

References

[1]

"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3." Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kikuchi H. DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3 and OT3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000001 Genomic DNA. Translation: BAA29589.1.
PIR	H71162.
RefSeq	NP_142473.1. NC_000961.1.
3D structure databases
HSSP	HSSP built from PDB template 1QVB based on UniProtKB Q9YGA8.
ProteinModelPortal	O58237.
ModBase	Search...
Protein family/group databases
CAZy	GH1. Glycoside Hydrolase Family 1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000001020; EBPYRP00000001020; EBPYRG00000001020.
GeneID	1444393.
GenomeReviews	Gene locus PH0501 in contig BA000001_GR.
KEGG	pho:PH0501.
NMPDR	fig|70601.1.peg.493.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000023099.
HOGENOM	HBG316462.
OMA	RNDWIGN.
ProtClustDB	CLSK865140.
Enzyme and pathway databases
BioCyc	PHOR70601:PH0501-MONOMER.
Family and domain databases
InterPro	IPR001360. Glyco_hydro_1. IPR018120. Glyco_hydro_1_AS. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01190.
PANTHER	PTHR10353. Glyco_hydro_1. 1 hit.
Pfam	PF00232. Glyco_hydro_1. 2 hits. [Graphical view]
PRINTS	PR00131. GLHYDRLASE1.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O58237_PYRHO

Accession

Primary (citable) accession number: O58237

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	November 16, 2011
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)