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Protein
Submitted name:

Uncharacterized protein

Gene

PH0471

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-472-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:PH0471Imported
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)Imported
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 4332HelicalSequence analysisAdd
BLAST
Transmembranei49 – 6719HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi70601.PH0471.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2EXDNMR-A72-143[»]
ProteinModelPortaliO58204.
SMRiO58204. Positions 72-143.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO58204.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 139129NfeDInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiarCOG01912. Archaea.
COG1585. LUCA.
HOGENOMiHOG000073963.
OMAiHYLVELE.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR002810. NfeD-like_C.
[Graphical view]
PfamiPF01957. NfeD. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O58204-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMGIAFPLS LLILGLLIIL LDMMISAFIT PIGIAFSVLG LLLLFNVNFY
60 70 80 90 100
LSFIVSLISA VIAYMAFARV VRRETTDIGG GKYTFELKGK VGKVVKIAED
110 120 130 140
HYLVEVEGDK WIAYSDEKLS LGDRVMVVDV DGLKLKVKRI PPQ
Length:143
Mass (Da):15,797
Last modified:August 1, 1998 - v1
Checksum:i6612CED083C0EBD5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29559.1.
PIRiB71159.
RefSeqiWP_010884582.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA29559; BAA29559; BAA29559.
GeneIDi1444369.
KEGGipho:PH0471.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29559.1.
PIRiB71159.
RefSeqiWP_010884582.1. NC_000961.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2EXDNMR-A72-143[»]
ProteinModelPortaliO58204.
SMRiO58204. Positions 72-143.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH0471.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA29559; BAA29559; BAA29559.
GeneIDi1444369.
KEGGipho:PH0471.

Phylogenomic databases

eggNOGiarCOG01912. Archaea.
COG1585. LUCA.
HOGENOMiHOG000073963.
OMAiHYLVELE.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-472-MONOMER.

Miscellaneous databases

EvolutionaryTraceiO58204.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012340. NA-bd_OB-fold.
IPR002810. NfeD-like_C.
[Graphical view]
PfamiPF01957. NfeD. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3Imported.
  2. "The solution structure of the C-terminal domain of NfeD reveals a novel membrane-anchored OB-fold."
    Kuwahara Y., Ohno A., Morii T., Yokoyama H., Matsui I., Tochio H., Shirakawa M., Hiroaki H.
    Protein Sci. 17:1915-1924(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: STRUCTURE BY NMR OF 72-143.

Entry informationi

Entry nameiO58204_PYRHO
AccessioniPrimary (citable) accession number: O58204
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: March 16, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.