O58153 (O58153_PYRHO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
188aa long hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase EMBL BAA29502.1

Gene names

Ordered Locus Names:

PH0416

Organism

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]

Taxonomic identifier

70601 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	188 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	lipopolysaccharide biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	dTDP-4-dehydrorhamnose 3,5-epimerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O58153 [UniParc]. Last modified August 1, 1998. Version 1. Checksum: 221C5D55F1A6B374	FASTA	188	21,879
	10 20 30 40 50 60 MVKMPFEFKR LEIPDVVLIK PKVFEDERGF FMETYKKSDF EKAGIKGEFV QDNHSKSKYG 70 80 90 100 110 120 VLRGLHFQRG SYAQAKIVRC IRGVIYDVAV DLRRNSPTFG KYVGVILSEY NKYQLYIPRG 130 140 150 160 170 180 FAHGFVVLSD VAEVVYKVDN VYAPDYEGGL IWNDPDVGIK WPIEDPILSE KDKKWPTLRE LIERGWVF

References

[1]

"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3." Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kikuchi H. DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3 and OT3.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000001 Genomic DNA. Translation: BAA29502.1.
PIR	A71152.
RefSeq	NP_142400.1. NC_000961.1.
3D structure databases
HSSP	HSSP built from PDB template 1DZR based on UniProtKB P26394.
ProteinModelPortal	O58153.
SMR	O58153. Positions 7-182.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBPYRT00000000779; EBPYRP00000000779; EBPYRG00000000779.
GeneID	1444314.
GenomeReviews	Gene locus PH0416 in contig BA000001_GR.
KEGG	pho:PH0416.
NMPDR	fig|70601.1.peg.414.
Organism-specific databases
CMR	Search...
Phylogenomic databases
GeneTree	EBGT00050000023328.
HOGENOM	HBG730537.
OMA	YQIRQPQ.
PhylomeDB	O58153.
ProtClustDB	CLSK785551.
Enzyme and pathway databases
BioCyc	PHOR70601:PH0416-MONOMER.
Family and domain databases
InterPro	IPR011051. Cupin_RmlC_type. IPR000888. dTDP_sugar_isom. IPR014710. RmlC-like_jellyroll. [Graphical view]
Gene3D	G3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit.
KO	K01790.
PANTHER	PTHR21047. dTDP_sugar_isom. 1 hit.
Pfam	PF00908. dTDP_sugar_isom. 1 hit. [Graphical view]
ProDom	PD001462. dTDP_sugar_isom. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF51182. RmlC_like_cupin. 1 hit.
TIGRFAMs	TIGR01221. RmlC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O58153_PYRHO

Accession

Primary (citable) accession number: O58153

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	December 14, 2011
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)