O58104 (O58104_PYRHO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
423aa long hypothetical beta-glucosidase EMBL BAA29440.1

Gene names

Ordered Locus Names:

PH0366

Organism

Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]

Taxonomic identifier

70601 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length	423 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
Technical term	3D-structure PDB 1VFF Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O58104 [UniParc]. Last modified August 1, 1998. Version 1. Checksum: C25E3680FDA43940	FASTA	423	50,330
	10 20 30 40 50 60 MPLKFPEMFL FGTATSSHQI EGNNRWNDWW YYEQIGKLPY RSGKACNHWE LYRDDIQLMT 70 80 90 100 110 120 SLGYNAYRFS IEWSRLFPEE NKFNEDAFMK YREIIDLLLT RGITPLVTLH HFTSPLWFMK 130 140 150 160 170 180 KGGFLREENL KHWEKYIEKV AELLEKVKLV ATFNEPMVYV MMGYLTAYWP PFIRSPFKAF 190 200 210 220 230 240 KVAANLLKAH AIAYELLHGK FKVGIVKNIP IILPASDKER DRKAAEKADN LFNWHFLDAI 250 260 270 280 290 300 WSGKYRGVFK TYRIPQSDAD FIGVNYYTAS EVRHTWNPLK FFFEVKLADI SERKTQMGWS 310 320 330 340 350 360 VYPKGIYMAL KKASRYGRPL YITENGIATL DDEWRVEFII QHLQYVHKAI EDGLDVRGYF 370 380 390 400 410 420 YWSFMDNYEW KEGFGPRFGL VEVDYQTFER RPRKSAYVYG EIARSKEIKD ELLKRYGLPE LQL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3." Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kikuchi H. DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3 and OT3.
[2]	"X-ray structure of a membrane-bound beta-glycosidase from the hyperthermophilic archaeon Pyrococcus horikoshii." Akiba T., Nishio M., Matsui I., Harata K. Proteins 57:422-431(2004) [PubMed: 15340929] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.50 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

BA000001 Genomic DNA. Translation: BAA29440.1.

PIR

C71144.

RefSeq

NP_142340.1. NC_000961.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1VFF	X-ray	2.50	A	1-423	[»]

ProteinModelPortal

O58104.

SMR

O58104. Positions 1-423.

ModBase

Search...

Protein family/group databases

CAZy

GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EBPYRT00000000158; EBPYRP00000000158; EBPYRG00000000158.

GeneID

1444240.

GenomeReviews

Gene locus PH0366 in contig BA000001_GR.

KEGG

pho:PH0366.

NMPDR

fig|70601.1.peg.340.

Organism-specific databases

CMR

Search...

Phylogenomic databases

GeneTree

EBGT00050000023099.

HOGENOM

HBG316462.

OMA

ACNHWEL.

ProtClustDB

CLSK689645.

Enzyme and pathway databases

BioCyc

PHOR70601:PH0366-MONOMER.

Family and domain databases

InterPro

IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.

KO

K01188.

PANTHER

PTHR10353. Glyco_hydro_1. 1 hit.

Pfam

PF00232. Glyco_hydro_1. 1 hit.
[Graphical view]

PRINTS

PR00131. GLHYDRLASE1.

SUPFAM

SSF51445. Glyco_hydro_cat. 1 hit.

PROSITE

PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

O58104_PYRHO

Accession

Primary (citable) accession number: O58104

Entry history

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	November 16, 2011
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)