PH0300

Functionⁱ

Sites

Feature key	Position(s)	Length	Description
Metal bindingⁱ	3 – 3	1	Zinc 1Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH
Metal bindingⁱ	6 – 6	1	Zinc 1Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH
Metal bindingⁱ	22 – 22	1	Zinc 1Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH
Metal bindingⁱ	25 – 25	1	Zinc 1; via pros nitrogenCombined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH
Metal bindingⁱ	272 – 272	1	Zinc 2Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH
Metal bindingⁱ	275 – 275	1	Zinc 2Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH
Metal bindingⁱ	284 – 284	1	Zinc 2Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH
Metal bindingⁱ	287 – 287	1	Zinc 2Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH

GO - Molecular functionⁱ

metal ion binding Source: UniProtKB-KW
tRNA binding Source: InterPro

GO - Biological processⁱ

tRNA thio-modification Source: InterPro
tRNA wobble uridine modification Source: InterPro

Complete GO annotation...

Keywords - Ligandⁱ

Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCycⁱ	PHOR70601:GJWR-283-MONOMER.

BioCycⁱ

PHOR70601:GJWR-283-MONOMER.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Uncharacterized proteinImported Automatic assertion inferred from database entriesⁱ EMBL:BAA29373.1
Gene namesⁱ	Ordered Locus Names:PH0300Imported Automatic assertion inferred from database entriesⁱ EMBL:BAA29373.1
Organismⁱ	Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)Imported Automatic assertion inferred from database entriesⁱ EMBL:BAA29373.1 Proteomes:UP000000752
Taxonomic identifierⁱ	70601 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Archaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus › Pyrococcus horikoshii
Proteomesⁱ	UP000000752 Componentⁱ: Chromosome

PTM / Processingⁱ

Amino acid modifications

Feature key	Position(s)	Length	Description	Graphical view	Feature identifier	Actions
Disulfide bondⁱ	128 ↔ 220		Combined sources Automatic assertion inferred from combination of experimental and computational evidenceⁱ PDB:3VRH

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	70601.PH0300.

STRINGⁱ

70601.PH0300.

Structureⁱ

3D structure databases

Select the link destinations:
PDBeⁱ
RCSB PDBⁱ
PDBjⁱ

Links Updated

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3VRH	X-ray	2.10	A	1-310	[»]

ProteinModelPortalⁱ

O58038.

ModBaseⁱ

Search...

MobiDBⁱ

Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	Length	Description	Graphical view	Feature identifier	Actions
Domainⁱ	50 – 218	169	ATP_bind_3InterPro annotation Automatic assertion inferred from signature matchⁱ Pfam:PF01171			Add BLAST

Phylogenomic databases

eggNOGⁱ	arCOG00042. Archaea. COG0037. LUCA.
HOGENOMⁱ	HOG000225863.
OMAⁱ	HWNTEYL.

Family and domain databases

Gene3Dⁱ	3.40.50.620. 1 hit.
InterProⁱ	IPR012089. 2-thiocytidine_tRNA_synth_TtcA. IPR000541. Ncs6/Tuc1/Ctu1. IPR014729. Rossmann-like_a/b/a_fold. IPR011063. TilS/TtcA_N. [Graphical view]
Pfamⁱ	PF01171. ATP_bind_3. 1 hit. [Graphical view]
PIRSFⁱ	PIRSF004976. ATPase_YdaO. 1 hit.
TIGRFAMsⁱ	TIGR00269. TIGR00269. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

O58038-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MKCKFCSREA YIKIHYPKMY LCEEHFKEYF ERKVSRTIER YKLLTKDERI 
        60         70         80         90        100
LVAVSGGKDS AVTAYVLKKL GYNIECLHIN LGISGYSEKS EEYAKKQCKL 
       110        120        130        140        150
IGAPLHIVRI KEILGYGIGE VKTRRPPCSY CGLTKRYIMN KFAYDNGFDA 
       160        170        180        190        200
IATGHNLDDE ASFLLNNILH WNTEYLAKGG PILPQQGKFI KKVKPLYEVT 
       210        220        230        240        250
EREVVAYALA VGLEYIVEEC PYARGATTLD MKGVLNELEE KRPGTKFNFV 
       260        270        280        290        300
RGYLKKKKLF EPEIKEKEIK ECKICRMPSS GDICAFCKFW GLKKEINFKV 
       310
SSTDEEPFGP

Length:310

Mass (Da):35,633

Last modified:August 1, 1998 - v1

Checksum:ⁱ87870CE4006C4246

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	BA000001 Genomic DNA. Translation: BAA29373.1.
PIRⁱ	F71455.
RefSeqⁱ	WP_010884395.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaⁱ	BAA29373; BAA29373; BAA29373.
GeneIDⁱ	1444182.
KEGGⁱ	pho:PH0300.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	BA000001 Genomic DNA. Translation: BAA29373.1.
PIRⁱ	F71455.
RefSeqⁱ	WP_010884395.1. NC_000961.1.

3D structure databases

Select the link destinations:
PDBeⁱ
RCSB PDBⁱ
PDBjⁱ

Links Updated

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3VRH	X-ray	2.10	A	1-310	[»]

ProteinModelPortalⁱ

O58038.

ModBaseⁱ

Search...

MobiDBⁱ

Search...

Protein-protein interaction databases

STRINGⁱ	70601.PH0300.

STRINGⁱ

70601.PH0300.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	BAA29373; BAA29373; BAA29373.
GeneIDⁱ	1444182.
KEGGⁱ	pho:PH0300.

Phylogenomic databases

eggNOGⁱ	arCOG00042. Archaea. COG0037. LUCA.
HOGENOMⁱ	HOG000225863.
OMAⁱ	HWNTEYL.

Enzyme and pathway databases

BioCycⁱ	PHOR70601:GJWR-283-MONOMER.

BioCycⁱ

PHOR70601:GJWR-283-MONOMER.

Family and domain databases

Gene3Dⁱ	3.40.50.620. 1 hit.
InterProⁱ	IPR012089. 2-thiocytidine_tRNA_synth_TtcA. IPR000541. Ncs6/Tuc1/Ctu1. IPR014729. Rossmann-like_a/b/a_fold. IPR011063. TilS/TtcA_N. [Graphical view]
Pfamⁱ	PF01171. ATP_bind_3. 1 hit. [Graphical view]
PIRSFⁱ	PIRSF004976. ATPase_YdaO. 1 hit.
TIGRFAMsⁱ	TIGR00269. TIGR00269. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ

O58038_PYRHO

Accessionⁱ

Primary (citable) accession number: O58038

Entry historyⁱ

Integrated into UniProtKB/TrEMBL:	August 1, 1998
Last sequence update:	August 1, 1998
Last modified:	September 7, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]

Entry statusⁱ

Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

3D-structureCombined sources, Complete proteomeImported

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

UniProtKB - O58038 (O58038_PYRHO)

UniProt

O58038 - O58038_PYRHO

Your basket is currently empty.

Uncharacterized protein

Select a section on the left to see content.

Functionⁱ

Sites

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywords - Ligandⁱ

Enzyme and pathway databases

Names & Taxonomyⁱ

PTM / Processingⁱ

Amino acid modifications

Interactionⁱ

Protein-protein interaction databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

Similar proteinsⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - O58038 (O58038_PYRHO)

UniProt

O58038 - O58038_PYRHO

Your basket is currently empty.

Uncharacterized protein

PH0300

Select a section on the left to see content.

<p>Provides any useful information about the protein, mostly biological knowledge.</p><p><a href='../manual/function_section' target='_top'>More...</a></p>Functioni

Sites

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:</p><p><a href='../manual/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

<p>Provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.</p><p><a href='../manual/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>Describes post-translational modifications (PTMs) and/or processing events.</p><p><a href='../manual/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Amino acid modifications

<p>Provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.</p><p><a href='../manual/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>Provides information on the tertiary and secondary structure of a protein.</p><p><a href='../manual/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>Provides information on sequence similarities with other proteins and the domain(s) present in a protein.</p><p><a href='../manual/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

<p>Displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.</p><p><a href='../manual/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>Is used to point to information related to entries and found in data collections other than UniProtKB.</p><p><a href='../manual/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>Provides general information on the entry.</p><p><a href='../manual/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>Contains any relevant information that doesn’t fit in any other defined sections</p><p><a href='../manual/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ