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Protein
Submitted name:

Uncharacterized protein

Gene

PH0300

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi3 – 31Zinc 1Combined sources
Metal bindingi6 – 61Zinc 1Combined sources
Metal bindingi22 – 221Zinc 1Combined sources
Metal bindingi25 – 251Zinc 1; via pros nitrogenCombined sources
Metal bindingi272 – 2721Zinc 2Combined sources
Metal bindingi275 – 2751Zinc 2Combined sources
Metal bindingi284 – 2841Zinc 2Combined sources
Metal bindingi287 – 2871Zinc 2Combined sources

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-283-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:PH0300Imported
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)Imported
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi128 ↔ 220Combined sources

Interactioni

Protein-protein interaction databases

STRINGi70601.PH0300.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VRHX-ray2.10A1-310[»]
ProteinModelPortaliO58038.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini50 – 218169ATP_bind_3InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiarCOG00042. Archaea.
COG0037. LUCA.
HOGENOMiHOG000225863.
OMAiHWNTEYL.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR012089. 2-thiocytidine_tRNA_synth_TtcA.
IPR000541. Ncs6/Tuc1/Ctu1.
IPR014729. Rossmann-like_a/b/a_fold.
IPR011063. TilS/TtcA_N.
[Graphical view]
PfamiPF01171. ATP_bind_3. 1 hit.
[Graphical view]
PIRSFiPIRSF004976. ATPase_YdaO. 1 hit.
TIGRFAMsiTIGR00269. TIGR00269. 1 hit.

Sequencei

Sequence statusi: Complete.

O58038-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKCKFCSREA YIKIHYPKMY LCEEHFKEYF ERKVSRTIER YKLLTKDERI
60 70 80 90 100
LVAVSGGKDS AVTAYVLKKL GYNIECLHIN LGISGYSEKS EEYAKKQCKL
110 120 130 140 150
IGAPLHIVRI KEILGYGIGE VKTRRPPCSY CGLTKRYIMN KFAYDNGFDA
160 170 180 190 200
IATGHNLDDE ASFLLNNILH WNTEYLAKGG PILPQQGKFI KKVKPLYEVT
210 220 230 240 250
EREVVAYALA VGLEYIVEEC PYARGATTLD MKGVLNELEE KRPGTKFNFV
260 270 280 290 300
RGYLKKKKLF EPEIKEKEIK ECKICRMPSS GDICAFCKFW GLKKEINFKV
310
SSTDEEPFGP
Length:310
Mass (Da):35,633
Last modified:August 1, 1998 - v1
Checksum:i87870CE4006C4246
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29373.1.
PIRiF71455.
RefSeqiWP_010884395.1. NC_000961.1.

Genome annotation databases

EnsemblBacteriaiBAA29373; BAA29373; BAA29373.
GeneIDi1444182.
KEGGipho:PH0300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA. Translation: BAA29373.1.
PIRiF71455.
RefSeqiWP_010884395.1. NC_000961.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3VRHX-ray2.10A1-310[»]
ProteinModelPortaliO58038.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi70601.PH0300.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA29373; BAA29373; BAA29373.
GeneIDi1444182.
KEGGipho:PH0300.

Phylogenomic databases

eggNOGiarCOG00042. Archaea.
COG0037. LUCA.
HOGENOMiHOG000225863.
OMAiHWNTEYL.

Enzyme and pathway databases

BioCyciPHOR70601:GJWR-283-MONOMER.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR012089. 2-thiocytidine_tRNA_synth_TtcA.
IPR000541. Ncs6/Tuc1/Ctu1.
IPR014729. Rossmann-like_a/b/a_fold.
IPR011063. TilS/TtcA_N.
[Graphical view]
PfamiPF01171. ATP_bind_3. 1 hit.
[Graphical view]
PIRSFiPIRSF004976. ATPase_YdaO. 1 hit.
TIGRFAMsiTIGR00269. TIGR00269. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO58038_PYRHO
AccessioniPrimary (citable) accession number: O58038
Entry historyi
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: September 7, 2016
This is version 92 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.