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O58023 (O58023_PYRHO) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
112aa long hypothetical methionyl-tRNA synthetase EMBL BAA29357.1
Gene names
Ordered Locus Names:PH0285
OrganismPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) [Complete proteome] [HAMAP]
Taxonomic identifier70601 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Thermococci › Thermococcales › Thermococcaceae › Pyrococcus

Protein attributes

Sequence length112 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
O58023 [UniParc].

Last modified August 1, 1998. Version 1.
Checksum: 2176B62390CC3E20

FASTA11212,887
        10         20         30         40         50         60 
MNYMELYDVD EFWKFQMKVG LVKKAEKIKR TKKLIKLIVD FGNEERTIVT GIADQIPPEE 

        70         80         90        100        110 
LEGKKFIFVV NLKPKKFSGV ESQGMLILAE TEDGKVYLIP VPEEVPVGAR VW

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References

« Hide 'large scale' references
[1]"Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3."
Kawarabayasi Y., Sawada M., Horikawa H., Haikawa Y., Hino Y., Yamamoto S., Sekine M., Baba S., Kosugi H., Hosoyama A., Nagai Y., Sakai M., Ogura K., Otsuka R., Nakazawa H., Takamiya M., Ohfuku Y., Funahashi T. expand/collapse author list , Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A., Aoki K., Kikuchi H.
DNA Res. 5:55-76(1998) [PubMed: 9679194] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3 and OT3.
[2]"Crystal structure of MetRS related protein from Pyrococcus horikoshii."
Murayama K., Kato-Murayama M., Shirouzu M., Yokoyama S.
Submitted (JUN-2005) to the PDB data bank
Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BA000001 Genomic DNA. Translation: BAA29357.1.
PIRF71453.
RefSeqNP_142274.1. NC_000961.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
2CWPX-ray2.10A1-112[»]
ProteinModelPortalO58023.
SMRO58023. Positions 4-112.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBPYRT00000000243; EBPYRP00000000243; EBPYRG00000000243.
GeneID1444169.
GenomeReviewsGene locus PH0285 in contig BA000001_GR.
KEGGpho:PH0285.
NMPDRfig|70601.1.peg.269.

Organism-specific databases

CMRSearch...

Phylogenomic databases

GeneTreeEBGT00070000032183.
HOGENOMHBG477532.
OMAPVKANIN.
PhylomeDBO58023.
ProtClustDBCLSK253510.

Enzyme and pathway databases

BioCycPHOR70601:PH0285-MONOMER.

Family and domain databases

InterProIPR004495. Met-tRNA-synth_Ia_bsu_C.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR002547. tRNA-bd_dom.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KOK06878.
PfamPF01588. tRNA_bind. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00399. MetG_C_term. 1 hit.
PROSITEPS50886. TRBD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO58023_PYRHO
AccessionPrimary (citable) accession number: O58023
Entry history
Integrated into UniProtKB/TrEMBL: August 1, 1998
Last sequence update: August 1, 1998
Last modified: December 14, 2011
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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