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Protein

Uncharacterized HTH-type transcriptional regulator PH0140

Gene

PH0140

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi31 – 50H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator PH0140
Gene namesi
Ordered Locus Names:PH0140
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001117621 – 158Uncharacterized HTH-type transcriptional regulator PH0140Add BLAST158

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
itself2EBI-15665518,EBI-15665518

GO - Molecular functioni

  • identical protein binding Source: IntAct

Protein-protein interaction databases

STRINGi70601.PH0140

Structurei

3D structure databases

ProteinModelPortaliO57880
SMRiO57880
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 73HTH asnC-typePROSITE-ProRule annotationAdd BLAST62

Phylogenomic databases

eggNOGiarCOG01580 Archaea
COG1522 LUCA
HOGENOMiHOG000115326
OMAiNIFCKIR
OrthoDBiPOG093Z0D8J

Family and domain databases

CDDicd00090 HTH_ARSR, 1 hit
Gene3Di1.10.10.101 hit
InterProiView protein in InterPro
IPR011991 ArsR-like_HTH
IPR000485 AsnC-type_HTH_dom
IPR011008 Dimeric_a/b-barrel
IPR019888 Tscrpt_reg_AsnC-typ
IPR019887 Tscrpt_reg_AsnC/Lrp_C
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01037 AsnC_trans_reg, 1 hit
PRINTSiPR00033 HTHASNC
SMARTiView protein in SMART
SM00344 HTH_ASNC, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF54909 SSF54909, 1 hit
PROSITEiView protein in PROSITE
PS50956 HTH_ASNC_2, 1 hit

Sequencei

Sequence statusi: Complete.

O57880-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITVPHSRKV ELDEIDRAIL RLLQEDGRMS YSEISRRINV PESTVRARVN
60 70 80 90 100
RLVKEGVIRK FAALINPFKA GYEIVAFIAV DAEPAKVKQV VEELAKFPEV
110 120 130 140 150
DVLGIVTGAH DIFMQVTVKD LQELERFILE KMAKIDGIKS TETSILTSVK

KWGYARVF
Length:158
Mass (Da):17,928
Last modified:August 1, 1998 - v1
Checksum:i8EBC6E37198BDB0D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA Translation: BAA29209.1
PIRiB71235

Genome annotation databases

EnsemblBacteriaiBAA29209; BAA29209; BAA29209
KEGGipho:PH0140

Similar proteinsi

Entry informationi

Entry nameiREG3_PYRHO
AccessioniPrimary (citable) accession number: O57880
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: August 1, 1998
Last modified: April 25, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome