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Protein

Uncharacterized HTH-type transcriptional regulator PH0061

Gene

PH0061

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi23 – 42H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciPHOR70601:G1G39-61-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator PH0061
Gene namesi
Ordered Locus Names:PH0061
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001117591 – 148Uncharacterized HTH-type transcriptional regulator PH0061Add BLAST148

Interactioni

Protein-protein interaction databases

STRINGi70601.PH0061

Structurei

Secondary structure

1148
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi6 – 17Combined sources12
Helixi23 – 29Combined sources7
Helixi34 – 46Combined sources13
Beta strandi49 – 57Combined sources9
Helixi60 – 62Combined sources3
Beta strandi64 – 75Combined sources12
Helixi76 – 86Combined sources11
Beta strandi92 – 101Combined sources10
Beta strandi103 – 113Combined sources11
Helixi114 – 126Combined sources13
Beta strandi130 – 145Combined sources16

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2DBBX-ray2.00A/B1-148[»]
ProteinModelPortaliO57802
SMRiO57802
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO57802

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 65HTH asnC-typePROSITE-ProRule annotationAdd BLAST62

Phylogenomic databases

eggNOGiarCOG01581 Archaea
COG1522 LUCA
HOGENOMiHOG000115326
OMAiLGTTRQR
OrthoDBiPOG093Z0D8J

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000485 AsnC-type_HTH_dom
IPR011008 Dimeric_a/b-barrel
IPR019888 Tscrpt_reg_AsnC-typ
IPR019885 Tscrpt_reg_HTH_AsnC-type_CS
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PRINTSiPR00033 HTHASNC
SMARTiView protein in SMART
SM00344 HTH_ASNC, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF54909 SSF54909, 1 hit
PROSITEiView protein in PROSITE
PS00519 HTH_ASNC_1, 1 hit
PS50956 HTH_ASNC_2, 1 hit

Sequencei

Sequence statusi: Complete.

O57802-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKLDRVDMQ LVKILSENSR LTYRELADIL NTTRQRIARR IDKLKKLGII
60 70 80 90 100
RKFTIIPDID KLGYMYAIVL IKSKVPSDAD KVISEISDIE YVKSVEKGVG
110 120 130 140
RYNIIVRLLL PKDIKDAENL ISEFLQRIKN AENVEVILIS EVRKFEII
Length:148
Mass (Da):17,242
Last modified:September 26, 2001 - v2
Checksum:i5FAC4E12710A21DA
GO

Sequence cautioni

The sequence BAA29129 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA Translation: BAA29129.1 Different initiation.
PIRiB71225
RefSeqiWP_048053019.1, NC_000961.1

Genome annotation databases

EnsemblBacteriaiBAA29129; BAA29129; BAA29129
GeneIDi1443959
KEGGipho:PH0061

Entry informationi

Entry nameiREG2_PYRHO
AccessioniPrimary (citable) accession number: O57802
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 26, 2001
Last sequence update: September 26, 2001
Last modified: April 25, 2018
This is version 106 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

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