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Protein
Submitted name:

Fatty acid binding protein H6-isoform

Gene

H6-FABP

Organism
Gobionotothen gibberifrons (Humped rockcod) (Notothenia gibberifrons)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Fatty acid binding protein H6-isoformImported
Gene namesi
Name:H6-FABPImported
OrganismiGobionotothen gibberifrons (Humped rockcod) (Notothenia gibberifrons)Imported
Taxonomic identifieri36202 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaPerciformesNotothenioideiNototheniidaeGobionotothen

Structurei

3D structure databases

ProteinModelPortaliO57665.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 2418FABPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.UniRule annotationSAAS annotation

Phylogenomic databases

HOVERGENiHBG005633.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O57665-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVEKFVGTWK MISSDNFDDY MKAIGVGFAT RQVGNRTKPN LVVSVDDQGF
60 70 80 90 100
VCLKSQSTFK TTEIKFKLNE PFEETTADDR KTRTVVTLEN GKLVQKQSWD
110 120 130
GKETNIEREI EDGKLVAKCI MGDVIAVRTY VMEG
Length:134
Mass (Da):15,152
Last modified:June 1, 1998 - v1
Checksum:iD16BCFD514A2B268
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U92446 mRNA. Translation: AAC60354.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U92446 mRNA. Translation: AAC60354.1.

3D structure databases

ProteinModelPortaliO57665.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

HOVERGENiHBG005633.

Family and domain databases

Gene3Di2.40.128.20. 1 hit.
InterProiIPR012674. Calycin.
IPR011038. Calycin-like.
IPR000463. Fatty_acid-bd.
IPR031259. iLBP.
IPR000566. Lipocln_cytosolic_FA-bd_dom.
[Graphical view]
PANTHERiPTHR11955. PTHR11955. 1 hit.
PfamiPF00061. Lipocalin. 1 hit.
[Graphical view]
PRINTSiPR00178. FATTYACIDBP.
SUPFAMiSSF50814. SSF50814. 1 hit.
PROSITEiPS00214. FABP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Two distinct types of fatty acid-binding protein are expressed in heart ventricle of Antarctic teleost fishes."
    Vayda M.E., Londraville R.L., Cashon R.E., Costello L., Sidell B.D.
    Biochem. J. 330:375-382(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Heart ventricleImported.

Entry informationi

Entry nameiO57665_GOBGI
AccessioniPrimary (citable) accession number: O57665
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: May 11, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.