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Protein
Submitted name:

Laminin beta 2-like chain

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Laminin beta 2-like chainImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2727Sequence analysisAdd
BLAST
Chaini28 – 17921765Sequence analysisPRO_5004159315Add
BLAST

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PRIDEiO57484.

Structurei

3D structure databases

ProteinModelPortaliO57484.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini43 – 282240Laminin N-terminalInterPro annotationAdd
BLAST
Domaini283 – 34664Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini347 – 40963Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini410 – 46960Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini470 – 52152Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini522 – 56746Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini561 – 772212Laminin IV type BInterPro annotationAdd
BLAST
Domaini778 – 82548Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini826 – 87146Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini872 – 92150Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini922 – 98059Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini981 – 103252Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1033 – 108856Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1089 – 113648Laminin EGF-likeInterPro annotationAdd
BLAST
Domaini1137 – 118347Laminin EGF-likeInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili1256 – 128328Sequence analysisAdd
BLAST
Coiled coili1443 – 150967Sequence analysisAdd
BLAST
Coiled coili1729 – 176638Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Laminin EGF-like domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000007552.
HOVERGENiHBG052301.
KOiK06243.
PhylomeDBiO57484.

Family and domain databases

InterProiIPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR002049. Laminin_EGF.
IPR013015. Laminin_IV_B.
IPR008211. Laminin_N.
[Graphical view]
PfamiPF00053. Laminin_EGF. 13 hits.
PF00055. Laminin_N. 1 hit.
[Graphical view]
SMARTiSM00181. EGF. 8 hits.
SM00180. EGF_Lam. 13 hits.
SM00136. LamNT. 1 hit.
[Graphical view]
PROSITEiPS00022. EGF_1. 10 hits.
PS01248. EGF_LAM_1. 12 hits.
PS50027. EGF_LAM_2. 13 hits.
PS51116. LAMININ_IVB. 1 hit.
PS51117. LAMININ_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O57484-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGPAALLPP LLLPLLSLLV PLPSGPGGTA WAASSPDSPQ GCAAGSCYPA
60 70 80 90 100
TGDLLVGRAP RLSASSTCGL RRPQPYCIVS HLQEEKKCFI CDSRRPYDAR
110 120 130 140 150
SNTDSHRIEN VLTTFAPRPK KAWWQAENGV EHVSIQLDLE AEFHFTHLIM
160 170 180 190 200
TFKTFRPAAM LVERSADFGR SWKVYRYFAY DCAASFPHVP RGPPRRIDDV
210 220 230 240 250
ICESRYSDIE PSTEGEVIYR VLDPAIPIRD PYSPAIQDLV RVTNLRVNLT
260 270 280 290 300
KLHTLGDNLL DSRREIREKY YYALYEMVLR GNCFCYGHAS ECAPLSGATA
310 320 330 340 350
TADGMVHGRC VCKHHTQGLN CERCEDFYHE LPWRPAEGSS TNACRRCDCN
360 370 380 390 400
EHSRRCHFDM AVFLATGNTS GAVCDGCQHN TMGRHCHLCK PFYYKDPSKD
410 420 430 440 450
LRDPTVCRAC NCYPEGTVDG GLCDGADDPE RGLIAGQCRC KEHVQGPRCD
460 470 480 490 500
RCKAGFFGLS AANPQGCQRC RCDPRGTVAD GSQCDPVSGD CLCKRLVTGR
510 520 530 540 550
SCDQCLPEHW ALSHDLPGCR PCECDVGGAH DNQCAMETGQ CRCRSHIVGR
560 570 580 590 600
QCEQVEPGFY RINLDHYTYE AEDARLHMGS VVEREPHAGH LASWTGPGFA
610 620 630 640 650
RMQEGGWVEF HVSDVPFSME YDVIIRYEPQ HPEPWKEVRM QVLRPSPVSA
660 670 680 690 700
SSPCGNTIPA DDQLSTSLLS GARYVVLPRP ICLERGVSYT IRLELGCATG
710 720 730 740 750
QQDPTASVLI DSLVLLPRYS SMEMFIAGGP AAMGRRETFE RYRCAQHFHT
760 770 780 790 800
VVLSPVAEPC SRLLHSLSAI LHNGALPCLC DPQGSLSAEC QPQGGQCRCK
810 820 830 840 850
PNVVGRRCHR CSPGTFGFGP RRCDPCQCSG EGSLSAVCDT VTGQCPCRQG
860 870 880 890 900
AHGSRCDRCQ PGHWGFPTCR PCQCNGHAEE CDPQTGSCLR CRDHTDGERC
910 920 930 940 950
QRCAAGHFGN PALGSGQHCR PCPCPDGPGG PRHFAASCYQ DGRSRQVVCH
960 970 980 990 1000
CSPGYTGPRC DECAPGYYGD PLQPGGHCRP CQCHNNIDTT DPEACDRRTG
1010 1020 1030 1040 1050
QCLRCLYNTA GPHCAECQPG YYGDAMRHSC RRCSCNTLGT DPNTCGPQQC
1060 1070 1080 1090 1100
QCDQRSGQCH CLPHVEGQSC DRCSPNFWNL GSGQGCEPCA CHPQHSLSPA
1110 1120 1130 1140 1150
CNQFTGQCSC RPGFGGRTCA NCQEQHWGDP RLQCRACDCD PRGIASTQCH
1160 1170 1180 1190 1200
HGSGHCDCRP GISGVRCDQC ARGFSGTFPA CQPCHPCFGD WDRVVQDLAS
1210 1220 1230 1240 1250
RTRHLEQRAS LLQHTGAAGA FEGTFRRLEE SLATIRDAVA ARNATAATAT
1260 1270 1280 1290 1300
FLTRATEGLR HEIGEATEKL TQLESELTVA QDANFNASHV LGMVDRGART
1310 1320 1330 1340 1350
LNHSLRELEQ RLHALKTSNF LGAFDSIRQS HWESQDAERR ADASTRVVPS
1360 1370 1380 1390 1400
PVSASSATRH HTEQLLASRR DAFNRQNAAS RRALTELAAR VRELSLQPVN
1410 1420 1430 1440 1450
KKVCGAAGDV PCAESPCGGA GCRDEDGARR CGGLSCSGAV STADSALDRA
1460 1470 1480 1490 1500
RHAQEELRRA AGEVAQLSHR VAEAKGKADE ARLQAQAALD KANQTRARVE
1510 1520 1530 1540 1550
HSNKELRELI SHVKAFLSQE GADPESIEVV ASRVLELSLP ASPAQIHRLA
1560 1570 1580 1590 1600
EEIKARVPSL ASVDAILEQT AGDVRRAGQL LQDAQRAKAR AEGVRGTAEA
1610 1620 1630 1640 1650
VQQALEEARQ AQGAAGQALH STAADIQHSE HTIGTMRAQT LGVEQQLASA
1660 1670 1680 1690 1700
MERLGLLEGQ TDALKVKRAN NSLAATRAHD AAGIARDRAS EAKQVLEGPL
1710 1720 1730 1740 1750
KDRYRAAQEL VQHRRRELQQ AGGRAQHVRE EAAGLLQDAQ GKLQKLRALE
1760 1770 1780 1790
EAYERNERVL DAKVAQLDGL EARMREVLAT INQQVQIYNT CQ
Length:1,792
Mass (Da):195,724
Last modified:June 1, 1998 - v1
Checksum:i4A4CBE0206F6A600
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038555 mRNA. Translation: AAB92586.1.
RefSeqiNP_989497.1. NM_204166.1.
UniGeneiGga.4292.
Gga.51527.

Genome annotation databases

GeneIDi373980.
KEGGigga:373980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038555 mRNA. Translation: AAB92586.1.
RefSeqiNP_989497.1. NM_204166.1.
UniGeneiGga.4292.
Gga.51527.

3D structure databases

ProteinModelPortaliO57484.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiO57484.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi373980.
KEGGigga:373980.

Organism-specific databases

CTDi3913.

Phylogenomic databases

HOGENOMiHOG000007552.
HOVERGENiHBG052301.
KOiK06243.
PhylomeDBiO57484.

Miscellaneous databases

NextBioi20813509.

Family and domain databases

InterProiIPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR002049. Laminin_EGF.
IPR013015. Laminin_IV_B.
IPR008211. Laminin_N.
[Graphical view]
PfamiPF00053. Laminin_EGF. 13 hits.
PF00055. Laminin_N. 1 hit.
[Graphical view]
SMARTiSM00181. EGF. 8 hits.
SM00180. EGF_Lam. 13 hits.
SM00136. LamNT. 1 hit.
[Graphical view]
PROSITEiPS00022. EGF_1. 10 hits.
PS01248. EGF_LAM_1. 12 hits.
PS50027. EGF_LAM_2. 13 hits.
PS51116. LAMININ_IVB. 1 hit.
PS51117. LAMININ_NTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "A novel laminin B1 chain variant in avian eye."
    O'Rear J.J.
    J. Biol. Chem. 267:20555-20557(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Primary structure and expression of a chicken laminin beta chain: evidence for four beta chains in birds."
    Liu J., Swasdison S., Xie W., Brewton R.G., Mayne R.
    Matrix Biol. 16:471-481(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO57484_CHICK
AccessioniPrimary (citable) accession number: O57484
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: May 11, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.