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Protein
Submitted name:

Lymphotactin

Gene

XCL1

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-GGA-380108 Chemokine receptors bind chemokines
R-GGA-416476 G alpha (q) signalling events

Names & Taxonomyi

Protein namesi
Submitted name:
LymphotactinImported
Gene namesi
Name:XCL1Imported
Synonyms:scyc1Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_501430657819 – 97Sequence analysisAdd BLAST79

Expressioni

Gene expression databases

BgeeiENSGALG00000015235

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000024539

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 88SCYInterPro annotationAdd BLAST58

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410IZ5E Eukaryota
ENOG4111C3M LUCA
GeneTreeiENSGT00390000005120
HOGENOMiHOG000036685
HOVERGENiHBG102118
KOiK05507
OMAiWVKKAVE
OrthoDBiEOG091G15G5
TreeFamiTF334888

Family and domain databases

CDDicd00271 Chemokine_C, 1 hit
InterProiView protein in InterPro
IPR001811 Chemokine_IL8-like_dom
IPR008105 Chemokine_XCL1/XCL2
IPR036048 Interleukin_8-like_sf
PANTHERiPTHR12015:SF101 PTHR12015:SF101, 1 hit
PfamiView protein in Pfam
PF00048 IL8, 1 hit
PRINTSiPR01731 LYMPHOTACTIN
SMARTiView protein in SMART
SM00199 SCY, 1 hit
SUPFAMiSSF54117 SSF54117, 1 hit

Sequencei

Sequence statusi: Complete.

O57411-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLHATVLLV IVWLGVFALH TAEGSVASQS MRKLSCVNLS TQKVDIRSIV
60 70 80 90
NYEKQKVPVE AVMFITANGI RICVHPEQKW VQSAMKRIDR RRTTRRR
Length:97
Mass (Da):11,131
Last modified:June 1, 1998 - v1
Checksum:i6A0B3E5A5336D8EB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000147 Genomic DNA No translation available.
AF006742 mRNA Translation: AAB99904.1
AJ242790 Genomic DNA Translation: CAB92981.1
RefSeqiNP_990377.1, NM_205046.1
UniGeneiGga.542

Genome annotation databases

EnsembliENSGALT00000024585; ENSGALP00000024539; ENSGALG00000015235
GeneIDi395914
KEGGigga:395914

Similar proteinsi

Entry informationi

Entry nameiO57411_CHICK
AccessioniPrimary (citable) accession number: O57411
Secondary accession number(s): F1NRB5
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: April 25, 2018
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health