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O57394 (O57394_NARJA) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
EL amyloid protein 699 EMBL BAA24230.1
Gene names
Name:el app699 EMBL BAA24230.1
OrganismNarke japonica (Japanese electric ray) (Torpedo japonica) EMBL BAA24230.1
Taxonomic identifier62965 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Chondrichthyes › Elasmobranchii › Batoidea › Torpediniformes › Narkidae › Narke

Protein attributes

Sequence length699 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Gene Ontology (GO)
   Cellular_componentintegral to membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionheparin binding

Inferred from electronic annotation. Source: InterPro

transition metal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O57394 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: 952915C309D50E5C

FASTA69978,880
        10         20         30         40         50         60 
MIPHLPGRLG MLLLAAAAAL VLAPLCRALE VPTDGGAGLL AAEPQIAMFC GKLNMHVNVQ 

        70         80         90        100        110        120 
TGKWVSDPSG TNTCFGTKEG ILRYCQEVYP DLQITNVVEA NQPITIQNWC KKGRKQCKGH 

       130        140        150        160        170        180 
PHIVVPYRCL VGEFVSDALL VPDKCKFLHR EKMDTCESHL YWHTVAKETC GDKIMNLHDY 

       190        200        210        220        230        240 
GMLLPCGIDE FRGVEFVCCP IPEENDKIDS DMDEEDSDVW WGGDDADYAD GGDKTVEEKP 

       250        260        270        280        290        300 
IEEEEEEDES DIDDEDDDDL DDEVVEDQYE DPTEHTTSST TTTTEAIEEV VRVPTTAAST 

       310        320        330        340        350        360 
PDAVDKYLET PGDENEHAYF QKAKERLEAK HRERMSKIMR EWEEAERQAK NLPKADKKAV 

       370        380        390        400        410        420 
IQRFQEMVES LEQEAASERQ QLVETHMARV EAMLNDRRRI ALENYLAALQ ADPPRPRHVL 

       430        440        450        460        470        480 
NALKKYSRAE QKDRQHTLKH FDHVRAVDPE KAAQIKSQVM THLHVIDERM NQSLSLLYKV 

       490        500        510        520        530        540 
PSVAEEIQDE VDELLQRERS YMDDMMANSV SDTRISYGND ALVPSLSETK TTIELLPDDG 

       550        560        570        580        590        600 
EFILDDLQPP HPFVIESIPA NTENEVEPVD ARPAPDRGLT TRPGSGLTGI KTEEIAELKM 

       610        620        630        640        650        660 
ETEFQQDSGY EVHHQKLVFF PKDVGSNKGA IIGLMVGGVV IATVIVITLV MLKKKQYTSI 

       670        680        690 
HHGVVEVDAA VTPEERHLSK MQQNGYENPT YKFFEQMQN

« Hide

References

[1]"cDNA isolation of Alzheimer's amyloid precursor protein from cholinergic nerve terminals of the electric organ of the electric ray."
Iijima K., Lee D.S., Okutsu J., Tomita S., Hirashima N., Kirino Y., Suzuki T.
Biochem. J. 330:29-33(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Electric lobe EMBL BAA24230.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB005544 mRNA. Translation: BAA24230.1.

3D structure databases

HSSPHSSP built from PDB template 1HZ3 based on UniProtKB Q16019.
ProteinModelPortalO57394.
SMRO57394. Positions 40-201, 303-494, 601-642, 668-699.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

HOVERGENHBG000051.

Family and domain databases

Gene3D3.30.1490.140. 1 hit.
3.90.570.10. 1 hit.
4.10.230.10. 1 hit.
InterProIPR008155. Amyloid_glyco.
IPR013803. Amyloid_glyco_Abeta.
IPR011178. Amyloid_glyco_Cu-bd.
IPR024329. Amyloid_glyco_E2_domain.
IPR008154. Amyloid_glyco_extra.
IPR019744. Amyloid_glyco_extracell_CS.
IPR015849. Amyloid_glyco_heparin-bd.
IPR019745. Amyloid_glyco_intracell_CS.
IPR019543. APP_amyloid_C.
[Graphical view]
PfamPF10515. APP_amyloid. 1 hit.
PF12924. APP_Cu_bd. 1 hit.
PF12925. APP_E2. 1 hit.
PF02177. APP_N. 1 hit.
PF03494. Beta-APP. 1 hit.
[Graphical view]
PRINTSPR00203. AMYLOIDA4.
PR00204. BETAAMYLOID.
SMARTSM00006. A4_EXTRA. 1 hit.
[Graphical view]
SUPFAMSSF56491. A4_extra. 1 hit.
SSF89811. Amyloid_glyco_Cu-bd. 1 hit.
SSF109843. SSF109843. 1 hit.
PROSITEPS00319. A4_EXTRA. 1 hit.
PS00320. A4_INTRA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO57394_NARJA
AccessionPrimary (citable) accession number: O57394
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: April 3, 2013
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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