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Protein
Submitted name:

Cellular nucleic acid binding protein

Gene

CNBP

Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Cellular nucleic acid binding proteinImported
Submitted name:
Cellular nucleic acid-binding proteinImported
Gene namesi
Name:CNBPImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus
Proteomesi
  • UP000000539 Componenti: Chromosome 12

Expressioni

Gene expression databases

BgeeiENSGALG00000005001.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000035496.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 20CCHC-typeInterPro annotationAdd BLAST15
Domaini48 – 61CCHC-typeInterPro annotationAdd BLAST14
Domaini69 – 84CCHC-typeInterPro annotationAdd BLAST16
Domaini93 – 106CCHC-typeInterPro annotationAdd BLAST14
Domaini113 – 129CCHC-typeInterPro annotationAdd BLAST17
Domaini131 – 147CCHC-typeInterPro annotationAdd BLAST17
Domaini153 – 166CCHC-typeInterPro annotationAdd BLAST14

Phylogenomic databases

eggNOGiKOG4400. Eukaryota.
COG5082. LUCA.
GeneTreeiENSGT00510000047065.
HOVERGENiHBG000397.
OMAiSRECDQD.
OrthoDBiEOG091G0LZK.

Family and domain databases

Gene3Di4.10.60.10. 4 hits.
InterProiView protein in InterPro
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00098. zf-CCHC. 7 hits.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 7 hits.
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 7 hits.

Sequencei

Sequence statusi: Complete.

O57348-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSNECFKCG RTGHWARECP TGIGRGRGMR SRGRAGFQFM SSSLPDICYR
60 70 80 90 100
CGESGHLAKD CDLQEDEACY NCGRGGHIAK DCKEPKRERE QCCYNCGKPG
110 120 130 140 150
HLARDCDHAD EQKCYSCGEF GHIQKDCTKV KCYRCGETGH VAINCSKTSE
160 170
VNCYRCGESG HLARECTIEA TA
Length:172
Mass (Da):19,044
Last modified:June 1, 1998 - v1
Checksum:iB8922EFFE72ED8F0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000013 Genomic DNA. No translation available.
AF035676 mRNA. Translation: AAB88490.1.
RefSeqiXP_015148443.1. XM_015292957.1.
XP_015148444.1. XM_015292958.1.
UniGeneiGga.3333.

Genome annotation databases

EnsembliENSGALT00000089893; ENSGALP00000058852; ENSGALG00000005001.
GeneIDi395731.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AADN04000013 Genomic DNA. No translation available.
AF035676 mRNA. Translation: AAB88490.1.
RefSeqiXP_015148443.1. XM_015292957.1.
XP_015148444.1. XM_015292958.1.
UniGeneiGga.3333.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000035496.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSGALT00000089893; ENSGALP00000058852; ENSGALG00000005001.
GeneIDi395731.

Organism-specific databases

CTDi7555.

Phylogenomic databases

eggNOGiKOG4400. Eukaryota.
COG5082. LUCA.
GeneTreeiENSGT00510000047065.
HOVERGENiHBG000397.
OMAiSRECDQD.
OrthoDBiEOG091G0LZK.

Gene expression databases

BgeeiENSGALG00000005001.

Family and domain databases

Gene3Di4.10.60.10. 4 hits.
InterProiView protein in InterPro
IPR001878. Znf_CCHC.
PfamiView protein in Pfam
PF00098. zf-CCHC. 7 hits.
SMARTiView protein in SMART
SM00343. ZnF_C2HC. 7 hits.
SUPFAMiSSF57756. SSF57756. 4 hits.
PROSITEiView protein in PROSITE
PS50158. ZF_CCHC. 7 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiO57348_CHICK
AccessioniPrimary (citable) accession number: O57348
Secondary accession number(s): F1N8C2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: February 15, 2017
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.