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Protein

Protein Tat

Gene

tat

Organism
Simian-Human immunodeficiency virus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ActivatorUniRule annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

RNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TatUniRule annotation
Gene namesi
Name:tatImported
OrganismiSimian-Human immunodeficiency virusImported
Taxonomic identifieri57667 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus groupunclassified Primate lentivirus group

Subcellular locationi

  • Host nucleushost nucleolus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Host nucleusUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliO57293.
SMRiO57293. Positions 1-86.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lentiviruses Tat family.UniRule annotation

Family and domain databases

Gene3Di4.10.20.10. 1 hit.
InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
PRINTSiPR00055. HIVTATDOMAIN.

Sequencei

Sequence statusi: Complete.

O57293-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEPVDPRLEP WKHPGSKPKT ACTNCYCKKC CFHCQVCFIT KALGISYGRK
60 70 80
KRRQRRRAHQ NSQTHQASLS KQPTSQPRGD PTGPKE
Length:86
Mass (Da):9,837
Last modified:June 1, 1998 - v1
Checksum:i5132A4D9796364F5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038399 Other DNA. Translation: AAB99973.1.
AF041850 Other DNA. Translation: AAD12139.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF038399 Other DNA. Translation: AAB99973.1.
AF041850 Other DNA. Translation: AAD12139.1.

3D structure databases

ProteinModelPortaliO57293.
SMRiO57293. Positions 1-86.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di4.10.20.10. 1 hit.
InterProiIPR001831. IV_Tat.
[Graphical view]
PfamiPF00539. Tat. 1 hit.
[Graphical view]
PRINTSiPR00055. HIVTATDOMAIN.
ProtoNetiSearch...

Publicationsi

  1. "Infection of cynomolgus monkeys with a chimeric HIV-1/SIVmac virus that expresses the HIV-1 envelope glycoproteins."
    Li J., Lord C.I., Haseltine W., Letvin N.L., Sodroski J.
    J. Acquir. Immune Defic. Syndr. 5:639-646(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SHIV-4Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: SHIV-4Imported.
  3. "Changes in human immunodeficiency virus type 1 envelope glycoproteins responsible for the pathogenicity of a multiply passaged simian-human immunodeficiency virus (SHIV-HXBc2)."
    Cayabyab M., Karlsson G.B., Etemad-Moghadam B.A., Hofmann W., Steenbeke T., Halloran M., Fanton J.W., Axthelm M.K., Letvin N.L., Sodroski J.G.
    J. Virol. 73:976-984(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO57293_9PLVG
AccessioniPrimary (citable) accession number: O57293
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: October 14, 2015
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.