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O55768 (VF184_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length971 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the IIV-6 184R family.

Contains 1 SF3 helicase domain.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 971971Putative helicase 184R
PRO_0000378038

Regions

Domain624 – 807184SF3 helicase
Nucleotide binding668 – 6758ATP Potential
Compositional bias517 – 5204Poly-Asp

Sequences

Sequence LengthMass (Da)Tools
O55768 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: 03321C81046A72E7

FASTA971111,656
        10         20         30         40         50         60 
MTDVFKVLTP AKNINGEHTH VSMGDTKGTW YLSLNKSQEF YNVYGLALKN GQKLSLAEKP 

        70         80         90        100        110        120 
GEYVPLLVDI DLKKEVNGYP NYGSNDFYND EDIINVVKIF QNAVSENVNR HAKKLTNKNL 

       130        140        150        160        170        180 
RCVVLEKDIF IERINESEDK YIVKKGIHLH FPHLFLPKKD IKNSFMPVVK TMIDQENVFQ 

       190        200        210        220        230        240 
DFINSMDNQI MPSSLIDDIS SKYWLMYGSS KEGLNKPYKI SKILDHNQQE ISISKCFKSE 

       250        260        270        280        290        300 
TCIDGSPITD TNVEFELPML LSINPKPSII SNKLFYFKEA PVKLCDALLP VVNNNREKEG 

       310        320        330        340        350        360 
RMSSREIEKM KKLTSFLSVS RADDYNQWWT VGITLFNIGT GRDCEEEALE AWKMFSSQST 

       370        380        390        400        410        420 
KYDESRCDLE WAEMKKKNRP LNARTMGSLI FMAKSDNPVA LEKYLLAEQM NIENWTSHQN 

       430        440        450        460        470        480 
LDVESIKKLK VPVFDTEIAE MFVSQHEDEY LNGNLGWFKF NGTIWSSLES VGRHMRPSLV 

       490        500        510        520        530        540 
SLSRSYLNLI PALKYITKTL QNDDEGYEPS DSGFGFDDDD SASTSGGKTT AEITKLVNSK 

       550        560        570        580        590        600 
IKLINDLAKK CQNNGPQMSL MKVIEDMIGI DNLNDKMDQN KQLIAFTNGV YDLSLFTFRQ 

       610        620        630        640        650        660 
GLPEDYITRQ MTIPYDITLT MENPKVIKML NFFKKIFPDE ELFEYFMLEN CEMYIGGNRD 

       670        680        690        700        710        720 
KILQIWTGEG DNGKSVTNKI IENKFGKLSV KFPKGMVTGD PPKAGACFPE LTRAQRGVRW 

       730        740        750        760        770        780 
AVVDEFAPDE TVNAGVIKNL TGGIDNLYAR DIQQKGKDVI DIDPFFKLIF ICNTIPNIRN 

       790        800        810        820        830        840 
PDNATWNRIR VIPFESTFKD SIDDISLEEQ KRDKIFLKDT SFCEKETIRE LGEAFAWYLI 

       850        860        870        880        890        900 
QVFIKKEQAR RDARLNGKSF KIKIPAKVNE ATELYKAQGN AIADYFNDKF EISDDDNDTI 

       910        920        930        940        950        960 
NIKLYYQDFL LWFSQTHSNK NVNIDKKKFM KLFVQHAKGD MNTFICTKLK LKETLEEFNL 

       970 
ENNEENGMPL F 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAB94479.1.
PIRT03181.
RefSeqNP_149647.1. NC_003038.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733035.

Family and domain databases

InterProIPR002755. DNA_primase_S.
IPR014015. Helicase_SF3_DNA-vir.
IPR014818. Phage/plasmid_primase_P4_C.
IPR014819. PriCT_2.
[Graphical view]
PfamPF08706. D5_N. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF08707. PriCT_2. 1 hit.
[Graphical view]
SMARTSM00885. D5_N. 1 hit.
[Graphical view]
PROSITEPS51206. SF3_HELICASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameVF184_IIV6
AccessionPrimary (citable) accession number: O55768
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: June 1, 1998
Last modified: May 14, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families