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O55764

- 172L_IIV6

UniProt

O55764 - 172L_IIV6

Protein

Putative helicase 172L

Gene

IIV6-172L

Organism
Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (01 Jun 1998)
      Previous versions | rss
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    Functioni

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi72 – 798ATPPROSITE-ProRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. helicase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Helicase, Hydrolase

    Keywords - Ligandi

    ATP-binding, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative helicase 172L (EC:3.6.4.-)
    Gene namesi
    ORF Names:IIV6-172L
    OrganismiInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
    Taxonomic identifieri176652 [NCBI]
    Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
    Virus hostiAcheta domesticus (House cricket) [TaxID: 6997]
    Chilo suppressalis (striped riceborer) [TaxID: 168631]
    Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
    Gryllus campestris [TaxID: 58607]
    Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]
    ProteomesiUP000001359: Genome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 606606Putative helicase 172LPRO_0000378036Add
    BLAST

    Proteomic databases

    PRIDEiO55764.

    Structurei

    3D structure databases

    ProteinModelPortaliO55764.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini59 – 264206Helicase ATP-bindingPROSITE-ProRule annotationAdd
    BLAST
    Domaini437 – 586150Helicase C-terminalPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Belongs to the SNF2/RAD54 helicase family.Curated
    Contains 1 helicase ATP-binding domain.PROSITE-ProRule annotation
    Contains 1 helicase C-terminal domain.PROSITE-ProRule annotation

    Family and domain databases

    Gene3Di3.40.50.300. 3 hits.
    InterProiIPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    IPR000330. SNF2_N.
    [Graphical view]
    PfamiPF00271. Helicase_C. 1 hit.
    PF00176. SNF2_N. 1 hit.
    [Graphical view]
    SMARTiSM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view]
    SUPFAMiSSF52540. SSF52540. 4 hits.
    PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O55764-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADAMNELCN LTQHLQVDDD QLSNLKLKNG YSLFPHQEKV MLWMKYRENL    50
    TKKECRKEGE KTWGVRGGII SLCMGLGKTL TALAYSFQNK ASFPTLVITS 100
    KTVMHEWKTE GVEKFFDSDN IRVLYLHRDY IKNIDKISRD DIMTYDIVIT 150
    TYDVCLFACK KGNYFLQCFE MGEEQSLMKN KIVAIHTRKR KDANLPNLKG 200
    TAVIYGTPWE RVICDESQKF ANPKTMTYKC IMAVYGKYKW CLTGTPIRNY 250
    ETDIWAQLRF CGYKGVERSH DWNRNGQGLI AFKDHNLISA IFTMSYDDAQ 300
    MSLPEKTENN LTVKLEGQHK EIYEGILTET REMYKKMMND LCSFTYVLAM 350
    FTRLRQCAIA PYLITPDAKR NSKEKKNCSE WCLDKFGGAG IKSSKILKIV 400
    EIIKSVTLND NPNCNSNPKS LQLLAKEKAY SCFGSDYIKS SNFEISHPTK 450
    IIVFSMFTSC LDLLSEAIKE DYPNFKFVQV DGDTKNRSEL FDQFKNDINT 500
    QGLFLTYKVG SEGLNLTEAT HCICIEPWWT NAVHNQAKAR LWRTGQTKQV 550
    YVHNVIIEGS IEEKIVEICK GKDDMAASYL EGKERIKSPV RAPKLDKFTL 600
    GKMLGI 606
    Length:606
    Mass (Da):69,658
    Last modified:June 1, 1998 - v1
    Checksum:iCE96322F3801A6F5
    GO

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti128 – 1292RD → KS.
    Natural varianti446 – 4461S → M.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAA62412.2.
    S75674 Genomic DNA. Translation: AAB33905.1.
    PIRiT03177.
    RefSeqiNP_149635.1. NC_003038.1.

    Genome annotation databases

    GeneIDi1732980.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF303741 Genomic DNA. Translation: AAA62412.2 .
    S75674 Genomic DNA. Translation: AAB33905.1 .
    PIRi T03177.
    RefSeqi NP_149635.1. NC_003038.1.

    3D structure databases

    ProteinModelPortali O55764.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi O55764.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1732980.

    Family and domain databases

    Gene3Di 3.40.50.300. 3 hits.
    InterProi IPR014001. Helicase_ATP-bd.
    IPR001650. Helicase_C.
    IPR027417. P-loop_NTPase.
    IPR000330. SNF2_N.
    [Graphical view ]
    Pfami PF00271. Helicase_C. 1 hit.
    PF00176. SNF2_N. 1 hit.
    [Graphical view ]
    SMARTi SM00487. DEXDc. 1 hit.
    SM00490. HELICc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52540. SSF52540. 4 hits.
    PROSITEi PS51192. HELICASE_ATP_BIND_1. 1 hit.
    PS51194. HELICASE_CTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
      Jakob N.J., Mueller K., Bahr U., Darai G.
      Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    2. "Identification of the primary structure and the coding capacity of the genome of insect iridescent virus type 6 between the genome coordinates 0.310 and 0.347 (7990 bp)."
      Sonntag K.-C., Schnitzler P., Janssen W., Darai G.
      Intervirology 37:287-297(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    3. "Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
      Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
      Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.

    Entry informationi

    Entry namei172L_IIV6
    AccessioniPrimary (citable) accession number: O55764
    Secondary accession number(s): Q89442
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: June 16, 2009
    Last sequence update: June 1, 1998
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3