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O55759 (VF161_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Protein attributes

Sequence length442 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DEAD box helicase family. DEAH subfamily.

Contains 1 helicase ATP-binding domain.

Ontologies

Keywords
   LigandATP-binding
Nucleotide-binding
   Molecular functionHelicase
Hydrolase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

DNA binding

Inferred from electronic annotation. Source: InterPro

helicase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 442442Putative helicase 161L
PRO_0000376958

Regions

Domain88 – 241154Helicase ATP-binding
Nucleotide binding101 – 1088ATP By similarity
Motif194 – 1974DEAH box

Sequences

Sequence LengthMass (Da)Tools
O55759 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: EAEF4513FE98CDBE

FASTA44250,758
        10         20         30         40         50         60 
MSCKININEI DPSVLSKLKS KAVLKIDNNG KPDNVILTRL INETAYIPFS MAKNFNLSIP 

        70         80         90        100        110        120 
LRNKFPAIST KFKGELRDNQ MIVRREAIDI LEKNHSVIIS CFTGFGKTIG AINLACKLRL 

       130        140        150        160        170        180 
KTLIIVTRVV LMNQWKESIL KFCESENKTI PIVEIISSNS KDEYVMCNFA IINAINIPKM 

       190        200        210        220        230        240 
EQGFLESFGT VIVDEVHLVM ARKTFRSLLY VTPRYLIALS ATSYRSDGLD ALFPIFFGKE 

       250        260        270        280        290        300 
KIIRELNRKH VIYRVDTLFK PQVKYGINGK MDWNALLEDQ ASNENRNKLI VQVVKNNPER 

       310        320        330        340        350        360 
TFLILVKRIK QGEWLAKEIE KECFNRVDHL LNNLSIDDEQ KEPKHVATLF GSNQKFDKNC 

       370        380        390        400        410        420 
KVLIGTSAKI GTGFDFDKLD TLLLAADVVE YYIQFIGRIM RKDDVNPIIF DLVDNNKTLQ 

       430        440 
KHYSERLKVY KKHGGIVKNY KL 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAB94470.1.
PIRT03172.
RefSeqNP_149624.1. NC_003038.1.

3D structure databases

ProteinModelPortalO55759.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733252.

Phylogenomic databases

ProtClustDBCLSP2743519.

Family and domain databases

Gene3D3.40.50.300. 2 hits.
InterProIPR006935. Helicase/UvrB_dom.
IPR014001. Helicase_ATP-bd.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamPF04851. ResIII. 1 hit.
[Graphical view]
SMARTSM00487. DEXDc. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 3 hits.
PROSITEPS51192. HELICASE_ATP_BIND_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameVF161_IIV6
AccessionPrimary (citable) accession number: O55759
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: June 1, 1998
Last modified: April 16, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families