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O55748

- RNC_IIV6

UniProt

O55748 - RNC_IIV6

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Protein
Putative ribonuclease 3
Gene
IIV6-142R
Organism
Invertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Digests double-stranded RNA By similarity.

Catalytic activityi

Endonucleolytic cleavage to 5'-phosphomonoester.

GO - Molecular functioni

  1. RNA binding Source: UniProtKB-KW
  2. ribonuclease III activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. RNA processing Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Endonuclease, Hydrolase, Nuclease

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ribonuclease 3 (EC:3.1.26.3)
Alternative name(s):
Ribonuclease III
Short name:
RNase III
Gene namesi
ORF Names:IIV6-142R
OrganismiInvertebrate iridescent virus 6 (IIV-6) (Chilo iridescent virus)
Taxonomic identifieri176652 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stageIridoviridaeIridovirus
Virus hostiAcheta domesticus (House cricket) [TaxID: 6997]
Chilo suppressalis (striped riceborer) [TaxID: 168631]
Gryllus bimaculatus (Two-spotted cricket) [TaxID: 6999]
Gryllus campestris [TaxID: 58607]
Spodoptera frugiperda (Fall armyworm) [TaxID: 7108]
ProteomesiUP000001359: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 292292Putative ribonuclease 3
PRO_0000376954Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliO55748.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini32 – 158127RNase III
Add
BLAST
Domaini204 – 27673DRBM
Add
BLAST

Sequence similaritiesi

Belongs to the IIV-6 142R family.
Contains 1 RNase III domain.

Family and domain databases

Gene3Di1.10.1520.10. 1 hit.
InterProiIPR014720. dsRNA-bd_dom.
IPR000999. RNase_III_dom.
[Graphical view]
PfamiPF00636. Ribonuclease_3. 1 hit.
[Graphical view]
SMARTiSM00535. RIBOc. 1 hit.
[Graphical view]
SUPFAMiSSF69065. SSF69065. 1 hit.
PROSITEiPS50137. DS_RBD. 1 hit.
PS50142. RNASE_3_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O55748-1 [UniParc]FASTAAdd to Basket

« Hide

MENNIENFDP SLVYFGDRGQ DFKKMIRSIL SLGMSDEYIP YLTTPESLNT    50
YNTAFTSRGA DDKNNYEMFE QLGDVSVNKF IVNYMYKRFP QLRNPNGVDV 100
VAKLKIKYAS KNQLQMLSES LDMWRFITAT YDERTNKKKP LLEDTFESFF 150
GATEWLIDSF IEDIALKQGN NNTYVGVGYN IINGILTTLF DRINISLKYE 200
NLVDAKTRFN EVIAEQKSII GDVKYEDEYK NGKHTSKIYR YPPNSNLKEL 250
LGIGTGTLKR DAQEQAASRA LETLALKHNI IKEAPDRFKA FM 292
Length:292
Mass (Da):33,664
Last modified:June 1, 1998 - v1
Checksum:iAEFBC85399291FC3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF303741 Genomic DNA. Translation: AAB94459.1.
PIRiT03085.
RefSeqiNP_149605.1. NC_003038.1.

Genome annotation databases

GeneIDi1733045.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF303741 Genomic DNA. Translation: AAB94459.1 .
PIRi T03085.
RefSeqi NP_149605.1. NC_003038.1.

3D structure databases

ProteinModelPortali O55748.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 1733045.

Family and domain databases

Gene3Di 1.10.1520.10. 1 hit.
InterProi IPR014720. dsRNA-bd_dom.
IPR000999. RNase_III_dom.
[Graphical view ]
Pfami PF00636. Ribonuclease_3. 1 hit.
[Graphical view ]
SMARTi SM00535. RIBOc. 1 hit.
[Graphical view ]
SUPFAMi SSF69065. SSF69065. 1 hit.
PROSITEi PS50137. DS_RBD. 1 hit.
PS50142. RNASE_3_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
    Jakob N.J., Mueller K., Bahr U., Darai G.
    Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. "Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
    Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
    Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.

Entry informationi

Entry nameiRNC_IIV6
AccessioniPrimary (citable) accession number: O55748
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: June 1, 1998
Last modified: May 14, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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