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O55733 (VF118_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein attributes

Sequence length515 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the IIV-6 118L/458R family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainTransmembrane
Transmembrane helix
   PTMLipoprotein
Myristate
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Potential
Chain2 – 515514Putative myristoylated protein 118L
PRO_0000377997

Regions

Transmembrane188 – 20821Helical; Potential
Transmembrane214 – 23421Helical; Potential
Transmembrane482 – 50221Helical; Potential

Amino acid modifications

Lipidation21N-myristoyl glycine; by host Potential

Sequences

Sequence LengthMass (Da)Tools
O55733 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: 8BAF339EBFBED51D

FASTA51555,327
        10         20         30         40         50         60 
MGASISSNVT KLVTDAIVRT SNEVVQTAHA TNNQSIVFDV KNTSGDVVIS GNTIRQTATI 

        70         80         90        100        110        120 
NMVGLSQALN NSDNNIKLDQ QIAQMAKAVI SGLNLAQLAD ANNTVDSLIK TCIEIKNVTT 

       130        140        150        160        170        180 
QQCMMNTSQK INVLVEGTKG NVSIVNNEIS QLATSIQSCV EKAASNNKNL QDITSSIQQA 

       190        200        210        220        230        240 
ATSEAKGLSL AMIALIIVAM GLTGVGGVYA GGKIIFPAVL IGSIVSFVLY FQWTVREISS 

       250        260        270        280        290        300 
YSFVQNTLSE SADCSIQKSS GESDNIGSAK SASEKCQNDN TCVAYEWQNG QAVYYKNMTI 

       310        320        330        340        350        360 
GNSCKSYYSN GAHKDTLPVI KKLIFQKGAR NPVNTDVANA WLNTLDGSFW VNSDPNVLKY 

       370        380        390        400        410        420 
FGGRYGRLPY QTRYLYASGG TYVGDDVNGV GWNQQGSFGK RANRTIDWGD GPPSTITSQA 

       430        440        450        460        470        480 
EGDIWVDYHD PSLLKVYTYI AQQGGGFIWQ SGQIIKGIGP IVNSNVENSK SVGFAIESKK 

       490        500        510 
QWLLYLAIGL LIVGVIGMAF SSGMFSKKNN GKSKQ 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAB94444.1.
PIRT03070.
RefSeqNP_149581.1. NC_003038.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733161.

Family and domain databases

InterProIPR003472. Virion_mem_poxvirus_L1.
[Graphical view]
PfamPF02442. L1R_F9L. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameVF118_IIV6
AccessionPrimary (citable) accession number: O55733
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: June 1, 1998
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families