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O55732 (VF117_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length249 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the IIV-6 117L family.

Ontologies

Keywords
   DomainSignal
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2020 Potential
Chain21 – 249229Uncharacterized protein 117L
PRO_0000377996

Sequences

Sequence LengthMass (Da)Tools
O55732 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: C876F1D49F93A342

FASTA24927,463
        10         20         30         40         50         60 
MSNQNKVLSL GLLLLAAVAA WYLWNKKNKK SGSQYVPASS IVEPFMPSLT YKVDKVYDAS 

        70         80         90        100        110        120 
APFGGQGNGD FMSVPGTFQS MVPPRFGMLD GAVVSVPTKN GSINPGIAPL YNNLDQDAMA 

       130        140        150        160        170        180 
FNPSSPLQQG IMDDNGEMIQ PVVYDRIMYA NRRSRLLEGS DFIRGDLPIF PQNLGWFSPS 

       190        200        210        220        230        240 
VQPHIDLRKG IVDNYDKDTA DQLKLLQMKS EGRFDRAFEG EMVPPNTLIP SYGTFINPSV 


GDVEIVNFE 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAB94443.1.
PIRT03069.
RefSeqNP_149580.1. NC_003038.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733358.

Phylogenomic databases

ProtClustDBCLSP2743516.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameVF117_IIV6
AccessionPrimary (citable) accession number: O55732
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: June 1, 1998
Last modified: April 3, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families