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O55708 (VF067_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein attributes

Sequence length456 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Membrane; Single-pass membrane protein Potential.

Sequence similarities

Belongs to the IIV-6 067R family.

Ontologies

Keywords
   Cellular componentMembrane
   DomainCoiled coil
Transmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 456456Uncharacterized protein 067R
PRO_0000377761

Regions

Transmembrane347 – 36519Helical; Potential
Coiled coil216 – 24833 Potential

Sequences

Sequence LengthMass (Da)Tools
O55708 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: 290CD897A855B798

FASTA45652,816
        10         20         30         40         50         60 
MKTIIIRKIP PIDDFKRFVP KRFSRFPQLY LELLENKNKV KLNCIGKEFV PTTPPLSTGR 

        70         80         90        100        110        120 
ETIVSKDPHV VQSSISNTPI RTEIKDTPRY EETPIKRTIT VTNVKTVKSS SISGMNGRNR 

       130        140        150        160        170        180 
LYDDDLFDDD RYKSPTTRKF QGEKRDEDIR LIPKSSNIGS SKYKPVLTRV EENENKKIHI 

       190        200        210        220        230        240 
DQRKESIVND ERKKNPEFRE KPDKNEDKKV KPPPSLKEIE NKGIDHEENE EDKKRELMFK 

       250        260        270        280        290        300 
LQLLQKQYPL RDIPDFTIRS EYKSMKKTYD IIVKQLSVDS SVETYKNYLV GGFMVCEMVF 

       310        320        330        340        350        360 
GRIGFDMEGF TQQQLLSMNS YEKLLLELGE KTYTPAGMDK WPVEVRLALA ILFNAVWFIA 

       370        380        390        400        410        420 
AKMIMKKTKI NILSLFNNTK GLNKSGTTPN SVSPRTWGNS KSPQSEFNFI GRKNENNSVG 

       430        440        450 
RTQMKGPSIN RIDEGFGSES DESRREMREQ GIETLK 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAB94419.1.
PIRT03045.
RefSeqNP_149530.1. NC_003038.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733049.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameVF067_IIV6
AccessionPrimary (citable) accession number: O55708
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: June 1, 1998
Last modified: May 14, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families