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O55703 (056R_IIV6) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length283 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Subcellular location

Membrane; Single-pass membrane protein Potential.

Ontologies

Keywords
   Cellular componentMembrane
   DomainCoiled coil
Transmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 283283Uncharacterized protein 056R
PRO_0000377972

Regions

Transmembrane13 – 3523Helical; Potential
Coiled coil37 – 6630 Potential

Sequences

Sequence LengthMass (Da)Tools
O55703 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: A5833A7EC5F6934C

FASTA28331,573
        10         20         30         40         50         60 
MEQKIDKKNS YSFGITSSTT VHVLGEVVAI GGILYYTHSQ VNQLNTKIAS LEKQILDLTN 

        70         80         90        100        110        120 
ILKHLSPHSF QQLQSSPTTQ STPPLPQSTP QSQQSQQSAV LPQRPSFLGG STPKESQSFP 

       130        140        150        160        170        180 
GVETRSLGEK TTRGKLKSPH PSQIPVTQEN FHYPYQTMNK TMRWEFLKPV ESDESEDETN 

       190        200        210        220        230        240 
CQNGVCTLQK QEKNVTFNGS VEQLKYGNFS PQRSTKTMIG SPSIRPLIPH ESIESVSESI 

       250        260        270        280 
ESSQDQSFSS RETISGNFKS KDDHQLSESE INQLVSKAIR TKK 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the first complete DNA sequence of an invertebrate iridovirus: coding strategy of the genome of Chilo iridescent virus."
Jakob N.J., Mueller K., Bahr U., Darai G.
Virology 286:182-196(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]"Comparative genomic analysis of the family Iridoviridae: re-annotating and defining the core set of iridovirus genes."
Eaton H.E., Metcalf J., Penny E., Tcherepanov V., Upton C., Brunetti C.R.
Virol. J. 4:11-11(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: GENOME REANNOTATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF303741 Genomic DNA. Translation: AAB94414.1.
PIRT03040.
RefSeqNP_149519.1. NC_003038.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1733282.

Family and domain databases

ProtoNetSearch...

Entry information

Entry name056R_IIV6
AccessionPrimary (citable) accession number: O55703
Entry history
Integrated into UniProtKB/Swiss-Prot: June 16, 2009
Last sequence update: June 1, 1998
Last modified: February 19, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program