O55157 (O55157_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cyclic nucleotide-gated cation channel beta subunit EMBL CAA04152.1

Submitted name:
Cyclic nucleotide-gated channel beta subunit 1b EMBL AAC19120.1

Gene names

Name:	Cngb1 RGD 621809
Synonyms:	CNG4.3 EMBL CAA04152.1

Organism

Rattus norvegicus (Rat) EMBL CAA04152.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	858 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Sequences

	Sequence		Length	Mass (Da)
	O55157 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: 10B07CC41119F9A4	FASTA	858	96,359
	10 20 30 40 50 60 MAKPGLNMEL NRLVQDQPPG QEGPRPGPPN PAEHLPNVPS YRPATTRIPV LVSRRTALSN 70 80 90 100 110 120 SNFTKEIRSS IRRLVPATKE HPELQVEDTD AEAGPLIPEE TIPPPERPPV SPAKSDTLAV 130 140 150 160 170 180 PSAATHRKKL PSQDDEAEEL KALSPAESPV VAWSDPTTPQ EADGEDRAAS TASQNSAIIN 190 200 210 220 230 240 DRLQELVKMF KERTEKVKEK LIDPDVTSDE ESPKPSPAKK APDSAPAQKP AEAEAAEEEH 250 260 270 280 290 300 YCDMLCCKFK RRPWKMYQFP QSIDPLTNLM YILWLFFVVL AWNWNCWLIP VRWAFPYQRA 310 320 330 340 350 360 DNIHLWLLMD YLCDFIYLLD ITVFQMRLQF VKGGDIITDK KEMRNNYLKS QRFKMDLLCL 370 380 390 400 410 420 LPLDFLYLKL GVNPLLRLPR CLKYMAFFEF NNRLEAILSK AYVYRVIRTT AYLLYSLHLN 430 440 450 460 470 480 SCLYYWASAF QGIGSTHWVY DGVGNSYIRC YYWAVKTLIT IGGLPDPQTL FEIVFQLLNY 490 500 510 520 530 540 FTGVFAFSVM IGQMRDVVGA ATAGQTYYRS CMDSTVKYMN FYKIPRSVQN RVKTWYEYTW 550 560 570 580 590 600 HSQGMLDESE LMVQLPDKMR LDLAIDVNYN IVSKVALFQG CDRQMIFDML KRLRSVVYLP 610 620 630 640 650 660 NDYVCKKGEI GREMYIIQAG QVQVLGGPDG KAVLVTLKAG SVFGEISLLA VGGGNRRTAN 670 680 690 700 710 720 VVAHGFTNLF ILDKKDLNEI LVHYPESQKL LRKKARRMLR NNNKPKEEKS VLILPPRAGT 730 740 750 760 770 780 PKLFNAALAA AGKMGPRGAK GGKLAHLRAR LKELAALEAA ARQQQLLEQA KSSQEAGGEE 790 800 810 820 830 840 GSGATDQPAP QEPSEPKEPP EPPAPSSPPP ASAKPEGSTE EAAGPPEPSV RIRVSPGPDP 850 GEQTLSVEML EEKKEEVE

References

[1]	"An isoform of the rod photoreceptor cyclic nucleotide-gated channel beta subunit expressed in olfactory neurons." Sautter A., Zong X., Hofmann F., Biel M. Proc. Natl. Acad. Sci. U.S.A. 95:4696-4701(1998) [PubMed: 9539801] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague-Dawley EMBL CAA04152.1. Tissue: Olfactory epithelium EMBL CAA04152.1.
[2]	"The native rat olfactory cyclic nucleotide-gated channel is composed of three distinct subunits." Bonigk W., Bradley J., Muller F., Sesti F., Boekhoff I., Ronnett G.V., Kaupp U.B., Frings S. J. Neurosci. 19:5332-5347(1999) [PubMed: 10377344] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	Boenigk W., Sesti F., Bradley J., Ronnett G., Mueller F., Kaupp U.B., Frings S. Submitted (MAY-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF068572 mRNA. Translation: AAC19120.1. AJ000515 mRNA. Translation: CAA04152.1.
IPI	IPI00324818.
UniGene	Rn.10733.
3D structure databases
HSSP	HSSP built from PDB template 1Q43 based on UniProtKB O88703.
ProteinModelPortal	O55157.
ModBase	Search...
Protein-protein interaction databases
MINT	MINT-1697304.
STRING	O55157.
Proteomic databases
PRIDE	O55157.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
UCSC	AJ000515. rat.
Phylogenomic databases
HOVERGEN	HBG051038.
Gene expression databases
ArrayExpress	O55157.
Genevestigator	O55157.
Family and domain databases
InterPro	IPR018490. cNMP-bd-like. IPR018488. cNMP-bd_CS. IPR000595. cNMP-bd_dom. IPR014710. RmlC-like_jellyroll. [Graphical view]
Gene3D	G3DSA:2.60.120.10. RmlC-like_jellyroll. 1 hit.
Pfam	PF00027. cNMP_binding. 1 hit. [Graphical view]
SMART	SM00100. cNMP. 1 hit. [Graphical view]
SUPFAM	SSF51206. cNMP_binding. 1 hit.
PROSITE	PS00888. CNMP_BINDING_1. 1 hit. PS00889. CNMP_BINDING_2. 1 hit. PS50042. CNMP_BINDING_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O55157_RAT

Accession

Primary (citable) accession number: O55157

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	June 1, 1998
Last modified:	September 21, 2011
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)