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O54890

- ITB3_MOUSE

UniProt

O54890 - ITB3_MOUSE

Protein

Integrin beta-3

Gene

Itgb3

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 130 (01 Oct 2014)
      Sequence version 2 (27 Jul 2011)
      Previous versions | rss
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    Functioni

    Integrin alpha-V/beta-3 is a receptor for cytotactin, fibronectin, laminin, matrix metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin, vitronectin and von Willebrand factor. Integrin alpha-IIB/beta-3 is a receptor for fibronectin, fibrinogen, plasminogen, prothrombin, thrombospondin and vitronectin. Integrins alpha-IIB/beta-3 and alpha-V/beta-3 recognize the sequence R-G-D in a wide array of ligands. Integrin alpha-IIB/beta-3 recognizes the sequence H-H-L-G-G-G-A-K-Q-A-G-D-V in fibrinogen gamma chain. Following activation integrin alpha-IIB/beta-3 brings about platelet/platelet interaction through binding of soluble fibrinogen. This step leads to rapid platelet aggregation which physically plugs ruptured endothelial surface.

    GO - Molecular functioni

    1. integrin binding Source: MGI
    2. protein binding Source: UniProtKB
    3. receptor activity Source: InterPro

    GO - Biological processi

    1. angiogenesis involved in wound healing Source: InterPro
    2. cell-matrix adhesion Source: MGI
    3. cell projection morphogenesis Source: BHF-UCL
    4. cell-substrate junction assembly Source: MGI
    5. integrin-mediated signaling pathway Source: UniProtKB-KW
    6. platelet aggregation Source: InterPro
    7. positive regulation of bone resorption Source: BHF-UCL
    8. positive regulation of cell migration Source: BHF-UCL
    9. positive regulation of osteoblast proliferation Source: BHF-UCL
    10. positive regulation of osteoclast differentiation Source: BHF-UCL
    11. regulation of cell migration Source: MGI

    Keywords - Molecular functioni

    Integrin, Receptor

    Keywords - Biological processi

    Cell adhesion

    Enzyme and pathway databases

    ReactomeiREACT_196606. ECM proteoglycans.
    REACT_196644. Syndecan interactions.
    REACT_198996. Elastic fibre formation.
    REACT_198998. Molecules associated with elastic fibres.
    REACT_215461. Signal transduction by L1.
    REACT_216309. Integrin cell surface interactions.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Integrin beta-3
    Alternative name(s):
    Platelet membrane glycoprotein IIIa
    Short name:
    GPIIIa
    CD_antigen: CD61
    Gene namesi
    Name:Itgb3
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 11

    Organism-specific databases

    MGIiMGI:96612. Itgb3.

    Subcellular locationi

    GO - Cellular componenti

    1. alpha9-beta1 integrin-ADAM8 complex Source: BHF-UCL
    2. apical plasma membrane Source: MGI
    3. external side of plasma membrane Source: MGI
    4. integrin alpha9-beta1 complex Source: BHF-UCL
    5. nucleus Source: MGI
    6. receptor complex Source: MGI

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525Sequence AnalysisAdd
    BLAST
    Chaini26 – 787762Integrin beta-3PRO_0000016345Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Disulfide bondi30 ↔ 460By similarity
    Disulfide bondi38 ↔ 48By similarity
    Disulfide bondi41 ↔ 74By similarity
    Disulfide bondi51 ↔ 63By similarity
    Disulfide bondi202 ↔ 209By similarity
    Disulfide bondi257 ↔ 298By similarity
    Glycosylationi345 – 3451N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi396 – 3961N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi399 ↔ 411By similarity
    Disulfide bondi431 ↔ 680By similarity
    Disulfide bondi458 ↔ 462By similarity
    Disulfide bondi473 ↔ 485By similarity
    Glycosylationi477 – 4771N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi482 ↔ 520By similarity
    Disulfide bondi487 ↔ 496By similarity
    Disulfide bondi498 ↔ 511By similarity
    Disulfide bondi526 ↔ 531By similarity
    Disulfide bondi528 ↔ 561By similarity
    Disulfide bondi533 ↔ 546By similarity
    Disulfide bondi548 ↔ 553By similarity
    Disulfide bondi567 ↔ 572By similarity
    Disulfide bondi569 ↔ 600By similarity
    Disulfide bondi574 ↔ 583By similarity
    Glycosylationi584 – 5841N-linked (GlcNAc...)Sequence Analysis
    Disulfide bondi585 ↔ 592By similarity
    Disulfide bondi606 ↔ 611By similarity
    Disulfide bondi608 ↔ 656By similarity
    Disulfide bondi613 ↔ 623By similarity
    Disulfide bondi626 ↔ 629By similarity
    Disulfide bondi633 ↔ 642By similarity
    Disulfide bondi639 ↔ 712By similarity
    Disulfide bondi660 ↔ 688By similarity
    Glycosylationi679 – 6791N-linked (GlcNAc...)Sequence Analysis
    Modified residuei772 – 7721PhosphotyrosineBy similarity
    Modified residuei778 – 7781PhosphothreonineBy similarity
    Modified residuei784 – 7841PhosphotyrosineBy similarity

    Post-translational modificationi

    Phosphorylated on tyrosine residues in response to thrombin-induced platelet aggregation. Probably involved in outside-in signaling By similarity.By similarity

    Keywords - PTMi

    Disulfide bond, Glycoprotein, Phosphoprotein

    Proteomic databases

    MaxQBiO54890.
    PaxDbiO54890.
    PRIDEiO54890.

    PTM databases

    PhosphoSiteiO54890.

    Expressioni

    Gene expression databases

    BgeeiO54890.
    CleanExiMM_ITGB3.
    GenevestigatoriO54890.

    Interactioni

    Subunit structurei

    Heterodimer of an alpha and a beta subunit. Beta-3 associates with either alpha-IIB or alpha-V. Interacts with FLNB and COMP. Interacts with PDIA6 following platelet stimulation. Interacts with SYK; upon activation by ITGB3 promotes platelet adhesion. Interacts with MYO10 By similarity. Interacts with DAB2. Interacts with FERMT2.By similarity2 Publications

    Protein-protein interaction databases

    BioGridi200830. 3 interactions.
    DIPiDIP-46416N.
    IntActiO54890. 4 interactions.
    MINTiMINT-4099028.
    STRINGi10090.ENSMUSP00000021028.

    Structurei

    3D structure databases

    ProteinModelPortaliO54890.
    SMRiO54890. Positions 28-787.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini26 – 717692ExtracellularSequence AnalysisAdd
    BLAST
    Topological domaini741 – 78747CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei718 – 74023HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini134 – 376243VWFAAdd
    BLAST
    Repeati462 – 51049IAdd
    BLAST
    Repeati511 – 55242IIAdd
    BLAST
    Repeati553 – 59139IIIAdd
    BLAST
    Repeati592 – 62837IVAdd
    BLAST

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni462 – 628167Cysteine-rich tandem repeatsAdd
    BLAST

    Sequence similaritiesi

    Belongs to the integrin beta chain family.Curated
    Contains 1 VWFA domain.Curated

    Keywords - Domaini

    Repeat, Signal, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG287997.
    GeneTreeiENSGT00720000108389.
    HOGENOMiHOG000252936.
    HOVERGENiHBG006190.
    InParanoidiQ3TZC6.
    KOiK06493.
    OMAiGHGQCSC.
    OrthoDBiEOG7T7GSB.
    TreeFamiTF105392.

    Family and domain databases

    Gene3Di1.20.5.630. 1 hit.
    3.40.50.410. 1 hit.
    InterProiIPR027068. Integrin_beta-3.
    IPR015812. Integrin_bsu.
    IPR014836. Integrin_bsu_cyt_dom.
    IPR002369. Integrin_bsu_N.
    IPR012896. Integrin_bsu_tail.
    IPR016201. Plexin-like_fold.
    IPR002035. VWF_A.
    [Graphical view]
    PANTHERiPTHR10082. PTHR10082. 1 hit.
    PTHR10082:SF25. PTHR10082:SF25. 1 hit.
    PfamiPF08725. Integrin_b_cyt. 1 hit.
    PF07965. Integrin_B_tail. 1 hit.
    PF00362. Integrin_beta. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002512. Integrin_B. 1 hit.
    PRINTSiPR01186. INTEGRINB.
    SMARTiSM00187. INB. 1 hit.
    SM00423. PSI. 1 hit.
    SM00327. VWA. 1 hit.
    [Graphical view]
    SUPFAMiSSF103575. SSF103575. 1 hit.
    SSF53300. SSF53300. 1 hit.
    SSF69687. SSF69687. 1 hit.
    PROSITEiPS00022. EGF_1. 2 hits.
    PS01186. EGF_2. 1 hit.
    PS00243. INTEGRIN_BETA. 3 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    O54890-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRAQWPGQLW AALLALGALA GVVVGESNIC TTRGVNSCQQ CLAVSPVCAW    50
    CSDETLSQGS PRCNLKENLL KDNCAPESIE FPVSEAQILE ARPLSSKGSG 100
    SSAQITQVSP QRIALRLRPD DSKIFSLQVR QVEDYPVDIY YLMDLSFSMK 150
    DDLSSIQTLG TKLASQMRKL TSNLRIGFGA FVDKPVSPYM YISPPQAIKN 200
    PCYNMKNACL PMFGYKHVLT LTDQVSRFNE EVKKQSVSRN RDAPEGGFDA 250
    IMQATVCDEK IGWRNDASHL LVFTTDAKTH IALDGRLAGI VLPNDGHCHI 300
    GTDNHYSAST TMDYPSLGLM TEKLSQKNIN LIFAVTENVV SLYQNYSELI 350
    PGTTVGVLSD DSSNVLQLIV DAYGKIRSKV ELEVRDLPEE LSLSFNATCL 400
    NNEVIPGLKS CVGLKIGDTV SFSIEAKVRG CPQEKEQSFT IKPVGFKDSL 450
    TVQVTFDCDC ACQAFAQPSS PRCNNGNGTF ECGVCRCDQG WLGSMCECSE 500
    EDYRPSQQEE CSPKEGQPIC SQRGECLCGQ CVCHSSDFGK ITGKYCECDD 550
    FSCVRYKGEM CSGHGQCNCG DCVCDSDWTG YYCNCTTRTD TCMSTNGLLC 600
    SGRGNCECGS CVCVQPGSYG DTCEKCPTCP DACSFKKECV ECKKFNRGTL 650
    HEENTCSRYC RDDIEQVKEL TDTGKNAVNC TYKNEDDCVV RFQYYEDTSG 700
    RAVLYVVEEP ECPKGPDILV VLLSVMGAIL LIGLATLLIW KLLITIHDRK 750
    EFAKFEEERA RAKWDTANNP LYKEATSTFT NITYRGT 787
    Length:787
    Mass (Da):86,738
    Last modified:July 27, 2011 - v2
    Checksum:i4F2E606969788794
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti114 – 1141A → V in AAB94086. 1 PublicationCurated
    Sequence conflicti389 – 3891E → G in AAB94086. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF026509 mRNA. Translation: AAB94086.1.
    AK157958 mRNA. Translation: BAE34283.1.
    AL603709, BX000996 Genomic DNA. Translation: CAM22629.1.
    BX000996, AL603709 Genomic DNA. Translation: CAM27926.1.
    CH466558 Genomic DNA. Translation: EDL34227.1.
    BC125518 mRNA. Translation: AAI25519.1.
    BC125520 mRNA. Translation: AAI25521.1.
    CCDSiCCDS25536.1.
    PIRiPN0510.
    RefSeqiNP_058060.2. NM_016780.2.
    UniGeneiMm.87150.

    Genome annotation databases

    EnsembliENSMUST00000021028; ENSMUSP00000021028; ENSMUSG00000020689.
    GeneIDi16416.
    KEGGimmu:16416.
    UCSCiuc007lwx.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF026509 mRNA. Translation: AAB94086.1 .
    AK157958 mRNA. Translation: BAE34283.1 .
    AL603709 , BX000996 Genomic DNA. Translation: CAM22629.1 .
    BX000996 , AL603709 Genomic DNA. Translation: CAM27926.1 .
    CH466558 Genomic DNA. Translation: EDL34227.1 .
    BC125518 mRNA. Translation: AAI25519.1 .
    BC125520 mRNA. Translation: AAI25521.1 .
    CCDSi CCDS25536.1.
    PIRi PN0510.
    RefSeqi NP_058060.2. NM_016780.2.
    UniGenei Mm.87150.

    3D structure databases

    ProteinModelPortali O54890.
    SMRi O54890. Positions 28-787.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 200830. 3 interactions.
    DIPi DIP-46416N.
    IntActi O54890. 4 interactions.
    MINTi MINT-4099028.
    STRINGi 10090.ENSMUSP00000021028.

    Chemistry

    BindingDBi O54890.

    PTM databases

    PhosphoSitei O54890.

    Proteomic databases

    MaxQBi O54890.
    PaxDbi O54890.
    PRIDEi O54890.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000021028 ; ENSMUSP00000021028 ; ENSMUSG00000020689 .
    GeneIDi 16416.
    KEGGi mmu:16416.
    UCSCi uc007lwx.2. mouse.

    Organism-specific databases

    CTDi 3690.
    MGIi MGI:96612. Itgb3.

    Phylogenomic databases

    eggNOGi NOG287997.
    GeneTreei ENSGT00720000108389.
    HOGENOMi HOG000252936.
    HOVERGENi HBG006190.
    InParanoidi Q3TZC6.
    KOi K06493.
    OMAi GHGQCSC.
    OrthoDBi EOG7T7GSB.
    TreeFami TF105392.

    Enzyme and pathway databases

    Reactomei REACT_196606. ECM proteoglycans.
    REACT_196644. Syndecan interactions.
    REACT_198996. Elastic fibre formation.
    REACT_198998. Molecules associated with elastic fibres.
    REACT_215461. Signal transduction by L1.
    REACT_216309. Integrin cell surface interactions.

    Miscellaneous databases

    ChiTaRSi ITGB3. mouse.
    NextBioi 289613.
    PROi O54890.
    SOURCEi Search...

    Gene expression databases

    Bgeei O54890.
    CleanExi MM_ITGB3.
    Genevestigatori O54890.

    Family and domain databases

    Gene3Di 1.20.5.630. 1 hit.
    3.40.50.410. 1 hit.
    InterProi IPR027068. Integrin_beta-3.
    IPR015812. Integrin_bsu.
    IPR014836. Integrin_bsu_cyt_dom.
    IPR002369. Integrin_bsu_N.
    IPR012896. Integrin_bsu_tail.
    IPR016201. Plexin-like_fold.
    IPR002035. VWF_A.
    [Graphical view ]
    PANTHERi PTHR10082. PTHR10082. 1 hit.
    PTHR10082:SF25. PTHR10082:SF25. 1 hit.
    Pfami PF08725. Integrin_b_cyt. 1 hit.
    PF07965. Integrin_B_tail. 1 hit.
    PF00362. Integrin_beta. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002512. Integrin_B. 1 hit.
    PRINTSi PR01186. INTEGRINB.
    SMARTi SM00187. INB. 1 hit.
    SM00423. PSI. 1 hit.
    SM00327. VWA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF103575. SSF103575. 1 hit.
    SSF53300. SSF53300. 1 hit.
    SSF69687. SSF69687. 1 hit.
    PROSITEi PS00022. EGF_1. 2 hits.
    PS01186. EGF_2. 1 hit.
    PS00243. INTEGRIN_BETA. 3 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. McHugh K.P., Teitelbaum S.L., Kitazawa S., Ross F.P.
      Submitted (SEP-1997) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: C3H/HeN.
    2. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Inner ear.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6J.
    4. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    5. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Brain.
    6. "Integrin beta cytoplasmic domain interactions with phosphotyrosine-binding domains: a structural prototype for diversity in integrin signaling."
      Calderwood D.A., Fujioka Y., de Pereda J.M., Garcia-Alvarez B., Nakamoto T., Margolis B., McGlade C.J., Liddington R.C., Ginsberg M.H.
      Proc. Natl. Acad. Sci. U.S.A. 100:2272-2277(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH DAB2.
    7. "Kindlin-2 controls bidirectional signaling of integrins."
      Montanez E., Ussar S., Schifferer M., Bosl M., Zent R., Moser M., Fassler R.
      Genes Dev. 22:1325-1330(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: INTERACTION WITH FERMT2.

    Entry informationi

    Entry nameiITB3_MOUSE
    AccessioniPrimary (citable) accession number: O54890
    Secondary accession number(s): Q3TZC6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 15, 1998
    Last sequence update: July 27, 2011
    Last modified: October 1, 2014
    This is version 130 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3