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O54845 (O54845_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hepatocyte nuclear factor 4 alpha EMBL AAC02906.1
Gene names
Name:Hnf4a MGI 109128
Synonyms:Hnf4 MGI 109128, HNF4alpha EMBL AAC02906.1
OrganismMus musculus (Mouse) EMBL AAC02906.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Mus › Mus

Protein attributes

Sequence length100 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the nuclear hormone receptor family. RuleBase RU000377

Contains 1 nuclear receptor DNA-binding domain. SAAS SAAS001628

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue1001 EMBL AAC02906.1

Sequences

Sequence LengthMass (Da)Tools
O54845 [UniParc].

Last modified June 1, 1998. Version 1.
Checksum: F70CC0C1E8D3C7E3

FASTA10010,964
        10         20         30         40         50         60 
MVSVNAPLGA PVASPYDTSP SEGANLNSSN SLGVSALCAI CGDRATAKHY GASSCDGCKG 

        70         80         90        100 
FFRRSVRKNH MYSCRFSRQC VVDKDKRNQC RYCRLKKCFR

« Hide

References

[1]"An alternative splice variant of the tissue specific transcription factor HNF4alpha predominates in undifferentiated murine cell types."
Nakhei H., Lingott A., Lemm I., Ryffel G.U.
Nucleic Acids Res. 26:497-504(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF015275 mRNA. Translation: AAC02906.1.
IPIIPI00273449.
UniGeneMm.202383.

3D structure databases

HSSPHSSP built from PDB template 1R0O based on UniProtKB P20153.
ProteinModelPortalO54845.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:109128. Hnf4a.

Phylogenomic databases

HOVERGENHBG082808.

Gene expression databases

GenevestigatorO54845.

Family and domain databases

Gene3D3.30.50.10. 1 hit.
InterProIPR001628. Znf_hrmn_rcpt.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PfamPF00105. zf-C4. 1 hit.
[Graphical view]
PRINTSPR00047. STROIDFINGER.
SMARTSM00399. ZnF_C4. 1 hit.
[Graphical view]
PROSITEPS00031. NUCLEAR_REC_DBD_1. 1 hit.
PS51030. NUCLEAR_REC_DBD_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

ChiTaRSHNF4A. mouse.
SOURCESearch...

Entry information

Entry nameO54845_MOUSE
AccessionPrimary (citable) accession number: O54845
Entry history
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: April 3, 2013
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info