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Protein
Submitted name:

AsnC family transcriptional regulator

Gene

lrp

Organism
Sulfolobus acidocaldarius
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AsnC family transcriptional regulatorImported
Submitted name:
Leucine-responsive-regulatory proteinImported
Submitted name:
Lrp proteinImported
Gene namesi
Name:lrpImported
ORF Names:ATY89_10165Imported, ATZ20_01720Imported
OrganismiSulfolobus acidocaldariusImported
Taxonomic identifieri2285 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000060043 Componenti: Chromosome
  • UP000065473 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi330779.Saci_1588.

Structurei

3D structure databases

ProteinModelPortaliO54287.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 70HTH asnC-type DNA-bindingInterPro annotationAdd BLAST62

Sequence similaritiesi

Contains 3 HTH asnC-type DNA-binding domains.UniRule annotation

Phylogenomic databases

eggNOGiarCOG01580. Archaea.
COG1522. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS50956. HTH_ASNC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O54287-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDRKKIEID AIDKKLLIEL LKDSRISLRR LAEEMNVSPA TLHNRLMRLV
60 70 80 90 100
QEGVVKGFTA LIDYSKLGYP VTSILMIKVD GKHILEFEKE VSNLDNVVAV
110 120 130 140 150
YDVVGEYDVM LIAKFRSIED LDTFIKSLLK NPKIERTYTS IVLNVVKEDP

RIKII
Length:155
Mass (Da):17,790
Last modified:June 1, 1998 - v1
Checksum:i97D6771A69476409
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP013694 Genomic DNA. Translation: ALU30267.1.
CP013695 Genomic DNA. Translation: ALU30983.1.
Y12821 Genomic DNA. Translation: CAA73351.1.
AJ459777 Genomic DNA. Translation: CAD31984.1.
PIRiT45215.
RefSeqiWP_011278403.1. NZ_LPSU01000003.1.

Genome annotation databases

GeneIDi3474271.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP013694 Genomic DNA. Translation: ALU30267.1.
CP013695 Genomic DNA. Translation: ALU30983.1.
Y12821 Genomic DNA. Translation: CAA73351.1.
AJ459777 Genomic DNA. Translation: CAD31984.1.
PIRiT45215.
RefSeqiWP_011278403.1. NZ_LPSU01000003.1.

3D structure databases

ProteinModelPortaliO54287.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi330779.Saci_1588.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi3474271.

Phylogenomic databases

eggNOGiarCOG01580. Archaea.
COG1522. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS50956. HTH_ASNC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO54287_9CREN
AccessioniPrimary (citable) accession number: O54287
Secondary accession number(s): Q4J8H8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: November 2, 2016
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.