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Protein
Submitted name:

Helix-turn-helix transcriptional regulator

Gene

CDO25_03500

Organism
Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi202 – 221H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Helix-turn-helix transcriptional regulatorImported
Submitted name:
Orf13Imported
Gene namesi
ORF Names:CDO25_03500Imported, CDO31_01490Imported
OrganismiRhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti)Imported
Taxonomic identifieri382 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000203858 Componenti: Chromosome
  • UP000204228 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliO54241
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini178 – 243HTH luxR-typeInterPro annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4108WDJ Bacteria
ENOG4111KMX LUCA
HOGENOMiHOG000295327

Family and domain databases

CDDicd06170 LuxR_C_like, 1 hit
Gene3Di1.10.10.101 hit
InterProiView protein in InterPro
IPR016032 Sig_transdc_resp-reg_C-effctor
IPR036693 TF_LuxR_autoind-bd_dom_sf
IPR000792 Tscrpt_reg_LuxR_C
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF00196 GerE, 1 hit
PRINTSiPR00038 HTHLUXR
SMARTiView protein in SMART
SM00421 HTH_LUXR, 1 hit
SUPFAMiSSF46894 SSF46894, 1 hit
SSF75516 SSF75516, 1 hit
PROSITEiView protein in PROSITE
PS00622 HTH_LUXR_1, 1 hit
PS50043 HTH_LUXR_2, 1 hit

Sequencei

Sequence statusi: Complete.

O54241-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYLATEDRD DAGRSGRNAR AARAATLVTR LQAMQRQINA KNFAVLRTNG
60 70 80 90 100
RGLPATRKLT CVLHNWGASC EENARDLIML YGDELLQHLD LSLLPVLWNG
110 120 130 140 150
QGEHQTAEVS DFGPFTRRLR ERKLPYSGIA FPIRLGAQGN GYVMFAGSYI
160 170 180 190 200
DASGEQIVEL HGRSAQIMAD LLAADEKRLF KAEALSDREI ACLQMAGDGH
210 220 230 240
ISEEIAEKMG LSVHTVNAYL GAATTKLDSV NRIQAIAKAI RLGYIS
Length:246
Mass (Da):26,957
Last modified:January 1, 1999 - v2
Checksum:iCB573BD4797D7FC4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP021793 Genomic DNA Translation: ASP50369.1
CP021818 Genomic DNA Translation: ASP90344.1
AJ224445 Genomic DNA Translation: CAA11949.1
RefSeqiWP_003529926.1, NZ_JZXD01000002.1

Genome annotation databases

KEGGismer:DU99_03315
PATRICifig|382.52.peg.668

Similar proteinsi

Entry informationi

Entry nameiO54241_RHIML
AccessioniPrimary (citable) accession number: O54241
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: January 1, 1999
Last modified: February 28, 2018
This is version 123 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported