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Protein

Flagellar M-ring protein

Gene

fliF

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

The M ring may be actively involved in energy transduction.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-658-MONOMER.
SMEL266834:GJF6-663-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Flagellar M-ring protein
Gene namesi
Name:fliF
Ordered Locus Names:R00646
ORF Names:SMc03014
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
Proteomesi
  • UP000001976 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei23 – 4321HelicalSequence analysisAdd
BLAST
Transmembranei436 – 45621HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Bacterial flagellum, Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 557557Flagellar M-ring proteinPRO_0000180885Add
BLAST

Interactioni

Subunit structurei

The basal body constitutes a major portion of the flagellar organelle and consists of five rings (E,L,P,S, and M) mounted on a central rod. The M ring is integral to the inner membrane of the cell and may be connected to the flagellar rod via the S ring. The S (supramembrane ring) lies just distal to the M ring. The L and P rings lie in the outer membrane and the periplasmic space, respectively (By similarity).By similarity

Protein-protein interaction databases

STRINGi266834.SMc03014.

Structurei

3D structure databases

ProteinModelPortaliO54239.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FliF family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105C1F. Bacteria.
COG1766. LUCA.
HOGENOMiHOG000265848.
KOiK02409.
OMAiQISMALA.
OrthoDBiEOG6KMB3J.

Family and domain databases

InterProiIPR013556. Flag_M-ring_C.
IPR000067. FlgMring_FliF.
IPR006182. YscJ_FliF.
[Graphical view]
PfamiPF01514. YscJ_FliF. 1 hit.
PF08345. YscJ_FliF_C. 1 hit.
[Graphical view]
PIRSFiPIRSF004862. FliF. 1 hit.
PRINTSiPR01009. FLGMRINGFLIF.
TIGRFAMsiTIGR00206. fliF. 1 hit.

Sequencei

Sequence statusi: Complete.

O54239-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLFDQFSTF TKNLSNLGQG KLIALAVAGV VAIGFVLGAG IYVNRPSFET
60 70 80 90 100
LYVGLERSDV TQISIALAEA NVDFEVGTDG GSIQVPVGMT GKARLLLAER
110 120 130 140 150
GLPSSANAGY ELFDNVGSLG LTSFMQEVTR VRALEGEIAR TIQQISGIAA
160 170 180 190 200
ARVHIVMPER GSFRKAEQTP TASVMIRASA TVGRSAASSI RHLVASSVPG
210 220 230 240 250
LDVDDVTVLD STGQLLASGD DPSNSALNQS LGVVQNVQSD LEKKIDNALA
260 270 280 290 300
PFLGMDNFRT SVTARLNTDA QQIQETVFDP ESRVERSTRV IKEEQKSSQQ
310 320 330 340 350
QPDNAATVQQ NVPQAAPRGG AGQQSSDEAE KKEEQTNYEI NSKTIATVKN
360 370 380 390 400
SYSIERLSIA VVVNRGRLAA MAGEPADQAK IDAYLQEMQK IVSSAAGIDP
410 420 430 440 450
GRGDVVTLNA MDFVETQLLD QAVPGPGIME MLTRNLGGII NALAFVAVAF
460 470 480 490 500
LVVWFGMRPL ARQLGFGGQA GKLEGEAAGL ELPDFSPAGA GAGGALMEGF
510 520 530 540 550
GSDFGFDGGD DLLNLGDEAG FNRRVKEGPE RRLARMVEIS EERAAKILRK

WAVDRAA
Length:557
Mass (Da):59,090
Last modified:October 24, 2001 - v2
Checksum:iCAA139C08D68570E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti46 – 461P → R in CAA11947 (PubMed:9858749).Curated
Sequence conflicti139 – 1391A → G in CAA11947 (PubMed:9858749).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ224445 Genomic DNA. Translation: CAA11947.1.
AL591688 Genomic DNA. Translation: CAC45218.1.
RefSeqiNP_384752.1. NC_003047.1.
WP_010968722.1. NC_003047.1.

Genome annotation databases

EnsemblBacteriaiCAC45218; CAC45218; SMc03014.
GeneIDi1232285.
KEGGisme:SMc03014.
PATRICi23630507. VBISinMel96828_2019.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ224445 Genomic DNA. Translation: CAA11947.1.
AL591688 Genomic DNA. Translation: CAC45218.1.
RefSeqiNP_384752.1. NC_003047.1.
WP_010968722.1. NC_003047.1.

3D structure databases

ProteinModelPortaliO54239.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266834.SMc03014.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC45218; CAC45218; SMc03014.
GeneIDi1232285.
KEGGisme:SMc03014.
PATRICi23630507. VBISinMel96828_2019.

Phylogenomic databases

eggNOGiENOG4105C1F. Bacteria.
COG1766. LUCA.
HOGENOMiHOG000265848.
KOiK02409.
OMAiQISMALA.
OrthoDBiEOG6KMB3J.

Enzyme and pathway databases

BioCyciRETL1328306-WGS:GSTH-658-MONOMER.
SMEL266834:GJF6-663-MONOMER.

Family and domain databases

InterProiIPR013556. Flag_M-ring_C.
IPR000067. FlgMring_FliF.
IPR006182. YscJ_FliF.
[Graphical view]
PfamiPF01514. YscJ_FliF. 1 hit.
PF08345. YscJ_FliF_C. 1 hit.
[Graphical view]
PIRSFiPIRSF004862. FliF. 1 hit.
PRINTSiPR01009. FLGMRINGFLIF.
TIGRFAMsiTIGR00206. fliF. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Mapping of 41 chemotaxis, flagellar and motility genes to a single region of the Sinorhizobium meliloti chromosome."
    Sourjik V., Sterr W., Platzer J., Bos I., Haslbeck M., Schmitt R.
    Gene 223:283-290(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: RU11/001.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.

Entry informationi

Entry nameiFLIF_RHIME
AccessioniPrimary (citable) accession number: O54239
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: October 24, 2001
Last modified: November 11, 2015
This is version 97 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.