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Protein
Submitted name:

ClaR protein

Gene

claR

Organism
Streptomyces clavuligerus
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
ClaR proteinImported
Gene namesi
Name:claRImported
OrganismiStreptomyces clavuligerusImported
Taxonomic identifieri1901 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Structurei

3D structure databases

ProteinModelPortaliO54198.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini329 – 38153HTH lysR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 2 hits.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O54198-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEVARRTGVR HGTVERRLDR LDRIVGLPLT LRSGHTARLT TAGSRILVAG
60 70 80 90 100
RRFFHQVDLA ARTHIFGHGS EAVDAPEVLS LVSTEPLLDE VVEDAAASLD
110 120 130 140 150
LLLSVRHEAP HQVAAQLAGY QVDAAYTWSL QSPRHSLERS VRTCEVLDDP
160 170 180 190 200
LWVILPRDHP LAAGGEVSLA DLRDETWVSE TGPGSEILVT RVFQLAGLTA
210 220 230 240 250
PTRLHITGAS VARGILRRGD AIGLGSPTHP AVQDPSLVRR SLAERPRRTT
260 270 280 290 300
SLLVDPTIVP RALAGRLAAL IAEVQLRRFA EHHRDLLDEP WWAQWYAERT
310 320 330 340 350
GADARRFGAG PDQGSVPGQP RAANWMWTIS ICSEAVARHG SINRAAAVLS
360 370 380 390 400
ISQSALTRRI HRLEQSLGAR LLLRAAGTSL TGPTRQFLRH VALYEAEFRE
410 420 430
AALACRSVER PLAQGHWPIR RGVAAGARMS G
Length:431
Mass (Da):47,076
Last modified:June 1, 1998 - v1
Checksum:i49B463C5AD10A255
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ000671 Genomic DNA. Translation: CAA04228.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ000671 Genomic DNA. Translation: CAA04228.1.

3D structure databases

ProteinModelPortaliO54198.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.10.10.10. 2 hits.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 2 hits.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO54198_STRCL
AccessioniPrimary (citable) accession number: O54198
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: February 17, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.