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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO5951

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi34Calcium 1Combined sources1
Metal bindingi34Calcium 2; via carbonyl oxygenCombined sources1
Metal bindingi37Calcium 2Combined sources1
Metal bindingi40Calcium 2Combined sources1
Metal bindingi43Calcium 3Combined sources1
Metal bindingi82Calcium 4Combined sources1
Metal bindingi137Calcium 5Combined sources1
Metal bindingi144Calcium 4Combined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi40 – 59H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation
LigandCalciumCombined sources, Metal-bindingCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO5951Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5951.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2ID3X-ray1.70A/B1-203[»]
ProteinModelPortaliO54180.
SMRiO54180.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO54180.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 77HTH tetR-typeInterPro annotationAdd BLAST61

Phylogenomic databases

HOGENOMiHOG000266637.
OMAiEWAPCVE.
OrthoDBiPOG091H0B4O.
PhylomeDBiO54180.

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like_sf.
IPR001647. HTH_TetR.
IPR011075. Tet_transcr_reg_TetR-rel_C.
IPR036271. Tet_transcr_reg_TetR-rel_C_sf.
PfamiView protein in Pfam
PF16859. TetR_C_11. 1 hit.
PF00440. TetR_N. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiView protein in PROSITE
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O54180-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDPAAPGTL RPGGRTARIR EAVLLAAGDA LAADGFDALD LGEIARRAGV
60 70 80 90 100
GKTTVYRRWG TPGGLAADLL ADMAEQSLPR ADTGALEEDL RANARLVVRT
110 120 130 140 150
LDDPRQGRLF RALIAASLCN EQAAEALHRF YAVRVDEWAG CVRDAVARGE
160 170 180 190 200
VPDGTDPHGV VAAVSAPLYY ALLNTGRSLT EADADRAARA ASTAARAGVW

VTG
Length:203
Mass (Da):21,242
Last modified:June 1, 1998 - v1
Checksum:iD79F9DC615F89900
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939125 Genomic DNA. Translation: CAA16208.1.
PIRiT35716.
RefSeqiNP_630068.1. NC_003888.3.
WP_011030557.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA16208; CAA16208; CAA16208.
GeneIDi1101393.
29661900.
KEGGisco:SCO5951.
PATRICifig|100226.15.peg.6048.

Similar proteinsi

Entry informationi

Entry nameiO54180_STRCO
AccessioniPrimary (citable) accession number: O54180
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: January 31, 2018
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported