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Protein
Submitted name:

Putative membrane protein

Gene

SCO5933

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative membrane proteinImported
Gene namesi
Ordered Locus Names:SCO5933Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei31 – 6333HelicalSequence analysisAdd
BLAST
Transmembranei75 – 9319HelicalSequence analysisAdd
BLAST
Transmembranei105 – 12319HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5933.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini154 – 374221PPM-type phosphataseInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000223802.
InParanoidiO54162.
OMAiPYGTRVI.
OrthoDBiPOG091H0DNP.
PhylomeDBiO54162.

Family and domain databases

InterProiIPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

O54162-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRPSRAAPA PAEDGADQGD GISIRTPPTR VVALVTVAAT VVTVVLGAVT
60 70 80 90 100
GTAVLLIGLL VFLPAFASAL CTPRQTTLVS AWVSIVVIVP VALSTEQLAD
110 120 130 140 150
RVTLALFALG FGALAVYGSW LRITREGTLV RLRSTAAAMQ RQILRPLPLL
160 170 180 190 200
TDDVLVDGVY EPVQQDKLVG GDIYDVAATP WGTRVLIGDV QGKGLPAIGM
210 220 230 240 250
AIDVVGAFRE AAHREPTVTA LVDSLEAAVV RHNGYAEQRG EPERFVTAVV
260 270 280 290 300
LGVDTGAETQ LVTCGHIPPY LLHDGTVTAV GAGTEHAPLG LADLVDEPRT
310 320 330 340 350
VSWFPFPAGA TLLLCTDGLT EARSPAGAFY PLETRLAGHV DITAGRLTHA
360 370 380 390
LVDDVHAFTE GPQQDDLAVL TVRRSPHRMR SPSVGEVSAA G
Length:391
Mass (Da):40,921
Last modified:June 1, 1998 - v1
Checksum:i82FFB59F34D65513
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939125 Genomic DNA. Translation: CAA16190.1.
PIRiT35698.
RefSeqiNP_630050.1. NC_003888.3.
WP_011030542.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA16190; CAA16190; CAA16190.
GeneIDi1101375.
KEGGisco:SCO5933.
PATRICi23741766. VBIStrCoe124346_6030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939125 Genomic DNA. Translation: CAA16190.1.
PIRiT35698.
RefSeqiNP_630050.1. NC_003888.3.
WP_011030542.1. NC_003888.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO5933.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA16190; CAA16190; CAA16190.
GeneIDi1101375.
KEGGisco:SCO5933.
PATRICi23741766. VBIStrCoe124346_6030.

Phylogenomic databases

HOGENOMiHOG000223802.
InParanoidiO54162.
OMAiPYGTRVI.
OrthoDBiPOG091H0DNP.
PhylomeDBiO54162.

Family and domain databases

InterProiIPR001932. PPM-type_phosphatase_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO54162_STRCO
AccessioniPrimary (citable) accession number: O54162
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: September 7, 2016
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.