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Protein
Submitted name:

Probable transcriptional regulator

Gene

SCO5914

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi20 – 39H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Probable transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO5914Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5914.

Structurei

3D structure databases

ProteinModelPortaliO54110.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 60HTH lysR-typeInterPro annotationAdd BLAST58

Phylogenomic databases

HOGENOMiHOG000233514.
InParanoidiO54110.
OMAiRMICAIA.
OrthoDBiPOG091H0CHD.
PhylomeDBiO54110.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50931. HTH_LYSR. 1 hit.

Sequencei

Sequence statusi: Complete.

O54110-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELELRHLRV LCAIADAGGV GRAAAALGYT QPAMSTQLRR IEGLLGEGVF
60 70 80 90 100
LRSSAGVELT AYGAQVVGRA REILALSDNL ARLRPPRSSG ATRRLRLGAI
110 120 130 140 150
NTPVVPTLLD VLREACPDLT VSVSSVYATG ELIDLLEAGE LDVALGCDYP
160 170 180 190 200
GLPLRHSPKL DHRAIRTVPV FVATPADHPL AHRLEVSLAD LSEDAWFVSA
210 220 230 240 250
DDGVGWPGAF YDACGAAGFR PAVTHEFHML DQLQSMIAKG LGVAAVQPTM
260 270 280 290 300
RPVGGVLVKP LAGDPLWQRH LLVWRRDSVE ASAVEVVHHH AVRAHWQLLS
310 320 330
QAPHFQKWVT RAYAPARPTN GAGKALPGTV
Length:330
Mass (Da):35,358
Last modified:June 1, 1998 - v1
Checksum:i61FED591DBDCCA9C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939125 Genomic DNA. Translation: CAA16451.1.
PIRiT34586.
RefSeqiNP_630032.1. NC_003888.3.
WP_011030530.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA16451; CAA16451; CAA16451.
GeneIDi1101356.
KEGGisco:SCO5914.
PATRICifig|100226.15.peg.6011.

Similar proteinsi

Entry informationi

Entry nameiO54110_STRCO
AccessioniPrimary (citable) accession number: O54110
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: January 31, 2018
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported