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Protein
Submitted name:

Nodulation repressor

Gene

nolR

Organism
Rhizobium leguminosarum
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Nodulation repressorImported
Submitted name:
NolR proteinImported
Submitted name:
Transcriptional regulatorImported
Gene namesi
Name:nolRImported
ORF Names:A4A59_30830Imported
OrganismiRhizobium leguminosarumImported
Taxonomic identifieri384 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000076193 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi216596.RL3537.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 9994HTH arsR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH arsR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41080HT. Bacteria.
COG0640. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01022. HTH_5. 1 hit.
[Graphical view]
PRINTSiPR00778. HTHARSR.
SMARTiSM00418. HTH_ARSR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50987. HTH_ARSR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O54057-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METSDLADHT NVAAALLSAM ANPKRLLILC SLVKGEVAVG VLATQVGLSQ
60 70 80 90 100
SALSQHLSKL RAQKLVKTRR DAQTIYYSST SEPVMKILAT LEDIYLVQNR

NRSAA
Length:105
Mass (Da):11,368
Last modified:June 1, 1998 - v1
Checksum:iF861C4DD61F73425
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU416274 Genomic DNA. Translation: ABZ04159.1.
AJ001934 Genomic DNA. Translation: CAA05107.1.
LVYU01000131 Genomic DNA. Translation: KZA97629.1.
RefSeqiWP_003561417.1. NZ_LVYU01000131.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU416274 Genomic DNA. Translation: ABZ04159.1.
AJ001934 Genomic DNA. Translation: CAA05107.1.
LVYU01000131 Genomic DNA. Translation: KZA97629.1.
RefSeqiWP_003561417.1. NZ_LVYU01000131.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216596.RL3537.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG41080HT. Bacteria.
COG0640. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR001845. HTH_ArsR_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01022. HTH_5. 1 hit.
[Graphical view]
PRINTSiPR00778. HTHARSR.
SMARTiSM00418. HTH_ARSR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50987. HTH_ARSR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Negative regulation of nodulation genes by nolR in Rhizobium leguminosarum bv. viciae strain TOM."
    Kiss E., Kereszt A., Olah B., Mergaert P., Staehelin C., Downie J.A., Davies A.E., Kondarosi A., Kondorosi E.
    Submitted (OCT-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: TOMImported.
  2. "Symbiotic plasmid is required for NolR to fully repress nodulation genes in Rhizobium leguminosarum A34."
    Li F., Hou B., Hong G.
    Acta Biochim. Biophys. Sin. 40:901-907(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 8401/pRL1JIImported.
  3. "Microsymbionts genomes from the relict species Vavilovia formosa."
    Chirak E., Kimeklis A., Kopat V., Andronov E.
    Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Vaf12Imported.

Entry informationi

Entry nameiO54057_RHILE
AccessioniPrimary (citable) accession number: O54057
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: July 6, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.