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Protein
Submitted name:

Probable conserved integral membrane protein

Gene

Rv0842

Organism
Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciMTBRV:RV0842-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable conserved integral membrane proteinImported
Gene namesi
Ordered Locus Names:Rv0842Imported
OrganismiMycobacterium tuberculosis (strain ATCC 25618 / H37Rv)Imported
Taxonomic identifieri83332 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
Proteomesi
  • UP000001584 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei25 – 4521HelicalSequence analysisAdd
BLAST
Transmembranei57 – 8125HelicalSequence analysisAdd
BLAST
Transmembranei88 – 10720HelicalSequence analysisAdd
BLAST
Transmembranei113 – 14028HelicalSequence analysisAdd
BLAST
Transmembranei152 – 17524HelicalSequence analysisAdd
BLAST
Transmembranei181 – 19919HelicalSequence analysisAdd
BLAST
Transmembranei231 – 25626HelicalSequence analysisAdd
BLAST
Transmembranei268 – 28821HelicalSequence analysisAdd
BLAST
Transmembranei300 – 31819HelicalSequence analysisAdd
BLAST
Transmembranei358 – 38124HelicalSequence analysisAdd
BLAST
Transmembranei387 – 41226HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiO53854.

Interactioni

Protein-protein interaction databases

STRINGi83332.Rv0842.

Structurei

3D structure databases

ProteinModelPortaliO53854.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 409409MFSInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiCOG0477. LUCA.
HOGENOMiHOG000042442.
OMAiYRPAMNA.
OrthoDBiEOG6ZPSWH.

Family and domain databases

InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O53854-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRYTGPERCS GDGQVRAAGD RYSTVIWLLG GNLLVRSAGF GYPFLAYHVA
60 70 80 90 100
GRGHGAGAVG AVVAAYGLGW AVGQLLCGWL VDRVGARVTL VSTMLVAAAV
110 120 130 140 150
LVLMAGLHTV PGLLVGAMIA GLVCDAPRPV LGAVIAELVA DPQRRAQLDG
160 170 180 190 200
WRYGWVLNIG AAITGGVGGV VAGWLDTPVL YWINGIGCAI FAGLAGRCIP
210 220 230 240 250
ADVCRRTESG LRACTAMSKV GYRQALSDKR LVLLAVSGLA TLTTLMGFFA
260 270 280 290 300
AVPMLMSASG LGVGAYGWVQ LINALAVVAV TPLLTPWLSK QLALGPRPDI
310 320 330 340 350
LAGAGVWVTL CMAAAGLART TVGFSVAAAA CSPGEIAWFV VAAGIVHRIA
360 370 380 390 400
PPAHGGRYHG IWSMAVAASS VAAPILAAFN LANGGRLVLA ATTVTVGFFG
410 420 430
AALCLPLARV LAAASCGPLS SKEPSRDSYQ
Length:430
Mass (Da):43,855
Last modified:July 5, 2004 - v3
Checksum:iB904FA823AD2F67F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL123456 Genomic DNA. Translation: CCP43590.1.
RefSeqiNP_215357.1. NC_000962.3.
WP_003404382.1. NC_000962.3.

Genome annotation databases

EnsemblBacteriaiCCP43590; CCP43590; Rv0842.
GeneIDi885616.
KEGGimtu:Rv0842.
mtv:RVBD_0842.
PATRICi18150399. VBIMycTub87468_0942.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL123456 Genomic DNA. Translation: CCP43590.1.
RefSeqiNP_215357.1. NC_000962.3.
WP_003404382.1. NC_000962.3.

3D structure databases

ProteinModelPortaliO53854.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi83332.Rv0842.

Proteomic databases

PaxDbiO53854.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCP43590; CCP43590; Rv0842.
GeneIDi885616.
KEGGimtu:Rv0842.
mtv:RVBD_0842.
PATRICi18150399. VBIMycTub87468_0942.

Phylogenomic databases

eggNOGiCOG0477. LUCA.
HOGENOMiHOG000042442.
OMAiYRPAMNA.
OrthoDBiEOG6ZPSWH.

Enzyme and pathway databases

BioCyciMTBRV:RV0842-MONOMER.

Family and domain databases

InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25618 / H37RvImported.

Entry informationi

Entry nameiO53854_MYCTU
AccessioniPrimary (citable) accession number: O53854
Secondary accession number(s): I6Y4Y5
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: July 5, 2004
Last modified: March 16, 2016
This is version 98 of the entry and version 3 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.