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Protein
Submitted name:

PCZA361.16

Gene
N/A
Organism
Amycolatopsis orientalis (Nocardia orientalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-18441.

Names & Taxonomyi

Protein namesi
Submitted name:
PCZA361.16Imported
OrganismiAmycolatopsis orientalis (Nocardia orientalis)Imported
Taxonomic identifieri31958 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPseudonocardialesPseudonocardiaceaeAmycolatopsis

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1OFNX-ray1.50A/B1-205[»]
1OI6X-ray1.40A/B1-205[»]
1WA4X-ray2.10A1-205[»]
ProteinModelPortaliO52806.
SMRiO52806. Positions 1-202.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO52806.

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR000888. dTDP_sugar_isom.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PANTHERiPTHR21047. PTHR21047. 1 hit.
PfamiPF00908. dTDP_sugar_isom. 1 hit.
[Graphical view]
ProDomiPD001462. dTDP_sugar_isom. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

O52806-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQARKLAVDG AIEFTPRVFA DDRGLLILPY QEEAFVEAHG GPLFRVAQTI
60 70 80 90 100
HSMSKRGVVR GIHYTVTPPG TAKYVYCARG KAMDIVIDIR VGSPTFGQWD
110 120 130 140 150
SVLMDQQDPR AVYLPVGVGH AFVALEDDTV MSYMLSRSYV TQDELALSAL
160 170 180 190 200
DPALGLPIDI GVEPIVSDRD RVAITLAEAQ RQGLLPDYTT SQEIERRLTA

VPVST
Length:205
Mass (Da):22,489
Last modified:June 1, 1998 - v1
Checksum:iDE847D419E20F1B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ223998 Genomic DNA. Translation: CAA11781.1.
PIRiT30591.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ223998 Genomic DNA. Translation: CAA11781.1.
PIRiT30591.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1OFNX-ray1.50A/B1-205[»]
1OI6X-ray1.40A/B1-205[»]
1WA4X-ray2.10A1-205[»]
ProteinModelPortaliO52806.
SMRiO52806. Positions 1-202.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BioCyciMetaCyc:MONOMER-18441.

Miscellaneous databases

EvolutionaryTraceiO52806.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR000888. dTDP_sugar_isom.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
PANTHERiPTHR21047. PTHR21047. 1 hit.
PfamiPF00908. dTDP_sugar_isom. 1 hit.
[Graphical view]
ProDomiPD001462. dTDP_sugar_isom. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF51182. SSF51182. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Sequencing and analysis of genes involved in the biosynthesis of a vancomycin group antibiotic."
    van Wageningen A., Kirkpatrick P., Williams D., Harris B., Kershaw J., Lennard N., Jones M., Jones S., Solenberg P.
    Chem. Biol. 5:155-162(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Purification, crystallization and preliminary structural studies of dTDP-4-keto-6-deoxy-glucose-5-epimerase (EvaD) from Amycolatopsis orientalis, the fourth enzyme in the dTDP-L-epivancosamine biosynthetic pathway."
    Merkel A.B., Temple G.K., Burkart M.D., Losey H.C., Beis K., Walsh C.T., Naismith J.H.
    Acta Crystallogr. D 58:1226-1228(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.50 ANGSTROMS).
  3. "The position of a key tyrosine in dTDP-4-Keto-6-deoxy-D-glucose-5-epimerase (EvaD) alters the substrate profile for this RmlC-like enzyme."
    Merkel A.B., Major L.L., Errey J.C., Burkart M.D., Field R.A., Walsh C.T., Naismith J.H.
    J. Biol. Chem. 279:32684-32691(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS).
  4. "Crystal Structure of the M131F L135A Evad Double Mutant."
    Merkel A.B., Naismith J.H.
    Submitted (OCT-2004) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.10 ANGSTROMS).

Entry informationi

Entry nameiO52806_AMYOR
AccessioniPrimary (citable) accession number: O52806
Entry historyi
Integrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: December 9, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.