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Protein
Submitted name:

Transcriptional activator CarR

Gene

carR

Organism
Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi186 – 205H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional activator CarRImported
Gene namesi
Name:carRImported
OrganismiPectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora)Imported
Taxonomic identifieri555 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesPectobacteriaceaePectobacterium

Structurei

3D structure databases

ProteinModelPortaliO52592.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini162 – 227HTH luxR-type DNA-bindingInterPro annotationAdd BLAST66

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR005143. TF_LuxR_autoind-bd_dom.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF03472. Autoind_bind. 1 hit.
PF00196. GerE. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF75516. SSF75516. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O52592-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDHEIHSFIK RKLKGVGDVW FSYFMMSKTS TSHPYIISNY PEAWMNEYLK
60 70 80 90 100
KEMFLSDPII VASLARITPF SWDDNDLVTL RAKNQDVFIS SVQHDISSGY
110 120 130 140 150
TFVLHDHDNN VATLSIANHL EDADFEKCMK SHENDLQMLL VNVHEKVMAY
160 170 180 190 200
QRAIKDQAKP PDSSRNALLS PRETEVLFLV SSGRTYKEVS RILGISEVTV
210 220 230 240
KFHINNSVRK LDVINSRHAI TKALELNLFN SPCEPVVMKH MESR
Length:244
Mass (Da):28,057
Last modified:June 1, 1998 - v1
Checksum:i3D4C8B8176FFE7F6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF041840 Genomic DNA. Translation: AAC38403.1.
RefSeqiWP_039474109.1. NZ_JUJG01000016.1.

Genome annotation databases

PATRICifig|555.16.peg.1439.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO52592_PECCC
AccessioniPrimary (citable) accession number: O52592
Entry historyiIntegrated into UniProtKB/TrEMBL: June 1, 1998
Last sequence update: June 1, 1998
Last modified: June 7, 2017
This is version 95 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)