O52575 (O52575_SELRU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Xylosidase/arabinosidase EMBL AAB97967.1

Gene names

Name:

Xsa EMBL AAB97967.1

Organism

Selenomonas ruminantium EMBL AAB97967.1

Taxonomic identifier

971 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Negativicutes › Selenomonadales › Veillonellaceae › Selenomonas

Protein attributes

Sequence length	538 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 3C2U
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O52575 [UniParc]. Last modified June 1, 1998. Version 1. Checksum: 7C007EE3175C5C9F	FASTA	538	61,137
	10 20 30 40 50 60 MNIQNPVLKG FNPDPSIVRA GDDYYIATST FEWFPGVQIH HSKDLVHWHL VAHPLSTTEF 70 80 90 100 110 120 LDMKGNPDSG GIWAPDLSYA DGKFWLIYTD VKVVDGMWKD CHNYLTTAED IKGPWSKPIL 130 140 150 160 170 180 LNGAGFDASL FHDPSGKKYL VNMYWDQRVY HHNFYGIALQ EYSVAEEKLI GKPEIIYKGT 190 200 210 220 230 240 DIAYTEGPHL YYINDMYYLM TAEGGTTYQH SETIARSKTI HGPYEIQPDY PLLSAWKEVH 250 260 270 280 290 300 NPLQKCGHAS LVETQNGQWY LAHLTGRPLP APAGFPSRER EQHAFCPLGR ETAIQKIEWQ 310 320 330 340 350 360 DGWPVVVGGQ QGSLEVEAPD LPQQEWAPTY EERDDFDKDT LNINFQTLRI PFSEHLGSLT 370 380 390 400 410 420 ARPGFLRLYG RESLQSKFTQ AHIARRWQSF NFDAGTSVEF SPNSFQQMAG LTCYYNTENW 430 440 450 460 470 480 SSIHVTWNEE KGRIIDLVTA DNGTFSMPLA GAEIPIPDEV KTVHFKVSVR GRIYQYAYSF 490 500 510 520 530 DGETFHTLPI ELPSWKLSDD YVRGGGFFTG AFVGINAIDI TGTALPADFD YFTYKELD

References

[1]	"Identification of a broad-specificity xylosidase/arabinosidase important for xylooligosaccharide fermentation by the ruminal anaerobe Selenomonas ruminantium GA192." Whitehead T.R., Cotta M.A. Curr. Microbiol. 43:293-298(2001) [PubMed: 11683366] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: GA192 EMBL AAB97967.1.
[2]	"Structure of the two-subsite beta-d-xylosidase from Selenomonas ruminantium in complex with 1,3-bis[tris(hydroxymethyl)methylamino]propane." Brunzelle J.S., Jordan D.B., McCaslin D.R., Olczak A., Wawrzak Z. Arch. Biochem. Biophys. 474:157-166(2008) [PubMed: 18374656] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.30 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF040720 Genomic DNA. Translation: AAB97967.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3C2U	X-ray	1.30	A/B/C/D	1-538	[»]

ProteinModelPortal

O52575.

SMR

O52575. Positions 1-538.

ModBase

Search...

Protein family/group databases

CAZy

GH43. Glycoside Hydrolase Family 43.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR008985. ConA-like_lec_gl.
IPR013320. ConA-like_subgrp.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_43_beta-prop.
[Graphical view]

Gene3D

G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
G3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.

PANTHER

PTHR22925. Glyco_hydro_43. 1 hit.

Pfam

PF04616. Glyco_hydro_43. 1 hit.
[Graphical view]

SUPFAM

SSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.

ProtoNet

Search...

Entry information

Entry name

O52575_SELRU

Accession

Primary (citable) accession number: O52575

Entry history

Integrated into UniProtKB/TrEMBL:	June 1, 1998
Last sequence update:	June 1, 1998
Last modified:	March 8, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)